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L1_007_000M1_scaffold_2566

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2566_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..140)
DNA (138bp) protein (46aa)
TonB-dependent receptor n=3 Tax=Bacteroides RepID=C6Z5M3_9BACE
outer membrane vitamin B12 receptor protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82162.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2566_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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157..291
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HVW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS55865.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_2566_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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695..1666
DNA (972bp) protein (324aa)
Hydrolase of the alpha/beta superfamily n=2 Tax=Bacteroides RepID=A6L209_BACV8
alpha/beta fold family hydrolase
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:CDF17224.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_2566_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1668..1787
DNA (120bp) protein (40aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UM69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS23033.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2566_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1902..2708)
DNA (807bp) protein (269aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EFG17925.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EFG17925.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Chorismate mutase/prephenate dehydratase n=10 Tax=root RepID=A6L211_BACV8
chorismate mutase/prephenate dehydratase
L1_007_000M1_scaffold_2566_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3128..3874
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=4 Tax=Bacteroides RepID=C6Z5M6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82157.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
GntR family transcriptional regulator
L1_007_000M1_scaffold_2566_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3934..5589
DNA (1656bp) protein (552aa)
BNR/Asp-box repeat protein n=3 Tax=Bacteroides RepID=C6Z5M7_9BACE
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EET16186.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
sialidase
L1_007_000M1_scaffold_2566_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5792..6847)
DNA (1056bp) protein (352aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase n=6 Tax=Bacteroides RepID=E5UYQ3_9BACE
phospho-2-dehydro-3-deoxyheptonate aldolase
Chorismate mutase type II family protein {ECO:0000313|EMBL:KDS25366.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2566_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6862..8046)
DNA (1185bp) protein (395aa)
Aminotransferase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4T2_9BACE
Aminotransferase class I and II family protein {ECO:0000313|EMBL:KDS55860.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
aminotransferase
L1_007_000M1_scaffold_2566_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8021..8863)
DNA (843bp) protein (281aa)
Prephenate dehydratase n=8 Tax=Bacteroides RepID=A6L214_BACV8
prephenate dehydratase
Uncharacterized protein {ECO:0000313|EMBL:EIY82153.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2566_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9121..9477)
DNA (357bp) protein (119aa)
HTH-type transcriptional activator HxlR n=7 Tax=root RepID=C6Z5N1_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY82152.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2566_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9667..10197
DNA (531bp) protein (177aa)
Putative protease I n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3A7_9BACE
Putative protease I {ECO:0000313|EMBL:KDS25359.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
protease I
L1_007_000M1_scaffold_2566_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10266..11414
DNA (1149bp) protein (383aa)
Aminotransferase n=4 Tax=Bacteroides RepID=E5UYQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82150.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
aminotransferase
L1_007_000M1_scaffold_2566_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11415..12416)
DNA (1002bp) protein (334aa)
Putative transmembrane protein n=2 Tax=Bacteroides vulgatus RepID=A6L218_BACV8
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS55855.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_2566_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12476..13426)
DNA (951bp) protein (317aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L219_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82148.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2566_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13441..15645)
DNA (2205bp) protein (735aa)
Glycoside hydrolase family 84 n=2 Tax=Bacteroides vulgatus RepID=A6L220_BACV8
glycoside hydrolase
Glycoside hydrolase family 84 {ECO:0000313|EMBL:ABR39734.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2566_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15701..17596)
DNA (1896bp) protein (632aa)
ATP-dependent DNA helicase, RecQ family protein {ECO:0000313|EMBL:KDS25371.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KDS25371.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
ATP-dependent DNA helicase RecQ n=2 Tax=Bacteroides vulgatus RepID=A6L221_BACV8
ATP-dependent DNA helicase RecQ
L1_007_000M1_scaffold_2566_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17714..19435)
DNA (1722bp) protein (574aa)
Single-stranded-DNA-specific exonuclease RecJ n=5 Tax=root RepID=D4V849_BACVU
single-stranded-DNA-specific exonuclease
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EOS06122.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2566_19
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19601..20812)
DNA (1212bp) protein (404aa)
Aminopeptidase C n=7 Tax=root RepID=A6L223_BACV8
aminopeptidase C
Aminopeptidase C {ECO:0000313|EMBL:EFV65744.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_007_000M1_scaffold_2566_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20841..22232)
DNA (1392bp) protein (464aa)
Xaa-Pro aminopeptidase n=6 Tax=Bacteroides RepID=A6L224_BACV8
Xaa-Pro aminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EIY82143.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2566_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22599..23615
DNA (1017bp) protein (339aa)
Integrase n=8 Tax=Bacteroidales RepID=E5US47_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA83450.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
tyrosine recombinase
Displaying 21 items

View Taxonomy