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L1_007_000M1_scaffold_2801

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2801_1
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1..117
DNA (117bp) protein (39aa)
conjugal transfer protein TraG n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37912
Type IV secretory pathway, VirD4 components
Uncharacterized protein {ECO:0000313|EMBL:EGX68189.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L1_007_000M1_scaffold_2801_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

183..2588
DNA (2406bp) protein (802aa)
TnpX site-specific recombinase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE6_9CLOT
TnpX site-specific recombinase {ECO:0000313|EMBL:EEA82081.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_2801_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2585..2983
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82080.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_000M1_scaffold_2801_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3098..3391
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82078.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_000M1_scaffold_2801_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3369..3659
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82077.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_000M1_scaffold_2801_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3998..4462
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67146.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L1_007_000M1_scaffold_2801_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4455..5180
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67145.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L1_007_000M1_scaffold_2801_8
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5156..5848
DNA (693bp) protein (231aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IT49_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS25028.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_007_000M1_scaffold_2801_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

5851..6999
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HU58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28006.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
membrane protein
L1_007_000M1_scaffold_2801_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7087..7476
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L144_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13334.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_000M1_scaffold_2801_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7564..8184
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035DA081
Uncharacterized protein {ECO:0000313|EMBL:CCY29925.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative DNA-binding protein
L1_007_000M1_scaffold_2801_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8668..9957
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06730.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Retron-type reverse transcriptase
L1_007_000M1_scaffold_2801_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10062..10373
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31638.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000M1_scaffold_2801_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10681..12285
DNA (1605bp) protein (535aa)
MobA/MobL family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD7_9CLOT
MobA/MobL family protein {ECO:0000313|EMBL:EEA82072.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
plasmid mobilization system relaxase
L1_007_000M1_scaffold_2801_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12353..12889
DNA (537bp) protein (179aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD6_9CLOT
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEA82071.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA primase (bacterial type)
L1_007_000M1_scaffold_2801_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12913..14211
DNA (1299bp) protein (433aa)
Virulence-associated protein E n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD5_9CLOT
Virulence-associated protein E {ECO:0000313|EMBL:EEA82070.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted P-loop ATPase and inactivated derivatives
L1_007_000M1_scaffold_2801_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14462..14641
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82069.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_000M1_scaffold_2801_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14643..15332
DNA (690bp) protein (230aa)
Resolvase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3G1_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERJ96294.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
TRAG family protein
L1_007_000M1_scaffold_2801_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15301..17169
DNA (1869bp) protein (623aa)
Uncharacterized protein n=3 Tax=root RepID=G1VJN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70704.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_2801_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17166..17564
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGR0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO31646.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_000M1_scaffold_2801_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17565..17846
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5X180_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56196.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_000M1_scaffold_2801_22

Not on your lists

17969..18247
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9GZN3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX08768.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_2801_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18240..18530
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82077.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_000M1_scaffold_2801_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18747..18995
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RB70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC46173.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L1_007_000M1_scaffold_2801_25
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18992..19663
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=7 Tax=Clostridium thermocellum RepID=E6UT86_CLOTL
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX42444.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_000M1_scaffold_2801_26
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19665..20672
DNA (1008bp) protein (336aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Integral membrane sensor signal transduction histidine kinase n=7 Tax=Clostridium thermocellum RepID=A3DCU5_CLOTH
periplasmic sensor signal transduction histidine kinase
L1_007_000M1_scaffold_2801_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20773..21453
DNA (681bp) protein (227aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZK5_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDE69440.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ABC transporter
L1_007_000M1_scaffold_2801_28
Bacillus sp. TS-2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21453..23957
DNA (2505bp) protein (835aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BDI4_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:GAF64455.1}; TaxID=1450694 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TS-2.;"
cell division protein FtsX
L1_007_000M1_scaffold_2801_29
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24000..24362
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12833.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L1_007_000M1_scaffold_2801_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24648..25973
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14131.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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