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L1_007_000M1_scaffold_2911

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2911_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(69..569)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H330_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS53300.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2911_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(576..3230)
DNA (2655bp) protein (885aa)
Outer membrane protein n=3 Tax=Bacteroides RepID=E5UP56_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79749.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_2911_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3300..3965)
DNA (666bp) protein (222aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=C6Z029_9BACE
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR38748.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2911_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4035..4532)
DNA (498bp) protein (166aa)
RNA polymerase ECF-type sigma factor n=2 Tax=Bacteroides RepID=E5UP58_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFV69283.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_2911_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4749..6452)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZX97_BACVU
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS53305.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2911_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6452..9493)
DNA (3042bp) protein (1014aa)
TonB-dependent receptor n=6 Tax=root RepID=D4VAI1_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOR98318.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000M1_scaffold_2911_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9814..10359
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor n=3 Tax=root RepID=C6Z033_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EET14251.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_2911_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10331..10909)
DNA (579bp) protein (193aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Phosphoribosylglycinamide formyltransferase n=6 Tax=Bacteroides RepID=A6KZ79_BACV8
phosphoribosylglycinamide formyltransferase
L1_007_000M1_scaffold_2911_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11062..11298
DNA (237bp) protein (79aa)
Acyl carrier protein n=15 Tax=Bacteroides RepID=ACP_BACV8
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L1_007_000M1_scaffold_2911_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11317..12582
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Bacteroides RepID=A6KZ77_BACV8
3-oxoacyl-ACP synthase
L1_007_000M1_scaffold_2911_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12585..13511
DNA (927bp) protein (309aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Ribonuclease 3 n=2 Tax=Bacteroides RepID=C6Z037_9BACE
ribonuclease III
L1_007_000M1_scaffold_2911_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13656..15209)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9J0G2_BACVU
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:KDS53314.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
secreted sulfatase
L1_007_000M1_scaffold_2911_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15228..15917)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYA7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17676.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
alpha-glycosidase
Displaying 13 items

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