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L1_007_000M1_scaffold_7_21

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(26342..30034)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 1215.0
  • Bit_score: 2160
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 1180.0
  • Bit_score: 1706
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYP4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 1215.0
  • Bit_score: 2160
  • Evalue 0.0

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Taxonomy

Clostridium sp. CAG:217 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3693
ATGGATAATAATTCAACAAACGAATTCAGTTCGATTAAAATAGGCCTTGCATCCCCCGAGCGTATCCGTGAATGGTCATACGGCGAGGTAACAAAGCCTGAAACAATAAATTACAGAACTCTTAAACCGGAACGCGACGGCCTTTTCTGTGAAAGAATTTTCGGCCCTATGAAAGACTGGGAATGTCACTGCGGCAAGTACAAGAGAGTTCGCTATAAGGGCAAGGTTTGTGAGCGTTGCGGCGTTGAAATCACAAGAGCAAAAGTTCGTCGTGAGCGTATGGGTCACATTGAACTTGCTGCCCCGGTATCACACATCTGGTATTTCAAGGGAATCCCGAGCCGTCTCGGCCTTGTTCTCGACATCAGCCCGAGATACCTTGAAAAGGTGCTTTATTTTGCACTTTACATTGTAACCGACCCGGGTGATACACCGCTTGAGAAAATGCAGATTCTCAACGAAAAAGAATACGCAGAAATGCGTGAAAGATATGAGGATGACTTTGAGGCAGGAATGGGCGCAGAGGCTATCAAAAAGCTTTTGCAGGATATTGATGTTCCTACTTTGAGAGATGAACTCACCGCAGAGCTTGAGGACGCAACAGGTCAAAAGAGAGTTAAGCTCCTCAAAAGACTTGATGTTGTAGATGCTTTCTACAACAGCGGCAACAAGCTTGAGTGGATGATTCTTGATGTTATTCCGGTTATCCCGCCCGACATCAGACCTATGGTTCAGCTTGACGGCGGCAGATTCGCAACATCGGACCTTAACGATTTATACAGAAGAGTTATCAACCGTAACAACCGTCTTAAGAGACTTCTTGAACTTCACGCTCCCGACATCATTGTCAGAAACGAAAAGAGAATGCTTCAGGAATCGGTTGACGCTCTCATTGATAACGGCAGACGCGGCAGACCTGTTACCGGTCCTAATAACAGACCGCTTAAATCACTTTCGGATATGCTTAAAGGTAAGCAGGGTCGTTTCCGTCAAAACCTTCTCGGTAAGCGTGTTGACTATTCCGGCCGTTCGGTTATCGTAGTAGGTCCGGAACTTAAAATGTATCAGTGCGGTTTGCCTAAAGAAATGGCAATCGAACTTTTCAAGCCGTTCGTTATGAAACGCCTTGTTGAAACAAATGTTGTTTCAAACATCAAGGCAGCAAGAAAAATGGTTGAAAAGGCTGCAAGACCAGAGGTTTGGGATGCTCTTGAGGTTGTAATCAAGGATCACCCGGTTATGTTGAACCGTGCTCCCACACTTCACAGACTTGGTATCCAGGCATTTGAGCCTGTTCTCGTAGAGGGCAGAGCAATCAAGCTTCATCCGCTTGCTTGTACAGCGTTCAACGCCGACTTCGACGGTGACCAAATGGCTGTCCATGTTCCTCTTTCCGCAGAGGCACAGGCAGAGGCAAGAATGCTTATGCTTGCCGCCAACAACCTTCTTAAGCCTGCAGACGGTAAGCCGGTTACAGTTCCTACACAGGATATGATTATCGGTTCTTACTATCTCACAATGCTTAAAGACGGCGAGGCAGGTTGCCCGACAGTTGAAAAGGACGCTGAGGGCAACGAATATACAAGATACAATATTTATCGCGACACCGATGAGGCTATGATGGCTTATCAGCAGGGTGAGCTCGGTCTTCACTCGGAGTGTCTCATCCGTTTCTCAAAGGAGAAGGACGGCAAAACCGTTTCAAGACTTGTTAAAACAACAATCGGTCGCGTAATCTTCAACAGACCTATTCCGCAGGATCTCGGCTTTGTTGACAGAACAAATCCGGAAAACGAATTTGAACTTGAAGTTTCATTCGTAGTTAAGAAAAAGCAGCTCGGTCAAATCGTTGACAAGTGCATCCGTGCTCACGGCATTGCAATTGCATCAAAGGTGCTTGACGAAATCAAGGCACAGGGATATAAATATTCTACAATTTCAGGTACAACAGTAGCCGTTATCGATGCCCTTATCCCTGAAAAGAAGAAAGAATATCTTGCCGAAGCAGAGGCAAAGGTTGATGAAATCACAAACCACTATAACTTCGGTGAAATGACAAACGACGAGCGTGCCGAGGCAGTTATTAAGGCTTGGGAGGAATGTACCAATAAGGTTTCCGACGAGCTTACTTCAAACTTCGACGGCACTCACAACCCAATTCACATGATGGTAGATTCAGGTGCCCGTGGTAGTACATCACAGCTTCGTCAGCTTGCCGGTATGAGAGGTCTTATCGCCAATACATCTGGTAAAACAATCGAAGTTCCGATTCGTGCTAACTACCGTGAAGGTCTTAACATTTTGGAATACTTCATTTCATCTCGTGGTGCTCGTAAAGGTCTTACCGATACAGCTCTTCGTACAGCCGACTCGGGTTACCTTACCCGTCGTCTTGTAGATGTATCGCAGGATGTTATTATCCGTGACACAGATTGTAAGTGCCATGACGGTATTGATGTTTACGCTGTTATGGACGGCAACCGTGTTCTTGAATCGCTTGAGGAAAGACTTGTCGGCAGATTCCTTGTTGACCCGGTAGTTGATCCCGAAACAGGCGAAGTTATCATGGATACAGACAGAATGATGAACGAGCAGGATGCAAAGCGTATTGTTGACGCAGGATATACTCATATTAAAATCCGTTCACTCATCACATGTAAGTCACGCCATGGTGTTTGCCGCAAGTGCTACGGCTCAAACCTTGCTTTCAACGAGCCTGTTCAGGTCGGTGAAGCAGTTGGTATCATCGCGGCACAGTCAATCGGTGAGCCTGGTACACAGCTTACAATGAGAACATTCCACACCGGCGGTGTTGCCGGCGGCGAAGACATTACTCAAGGTCTTCCGAGAGTTGAGGAATTGTTCGAAGCAAGAAAGCCGAAGACTCTTGCTATTCTCAGTGAGATTGACGGTGAGGTCAGATTTGAGGAAATCAAGAAGAGCCGCCATGTTGTTGTATTCAACAGCGAAACAGGCGAAGAGAAAAAATACCTCATTCCTTACGGTGCTCACCTTACACCTCAAATTGTTGAAGGCGCTCATATCGAAAAGGGTGCAGAAATCACAGTAGGTTCAAAGAATCCTCACGATGTTCTTGCTATCCTCGGTAAAGAGGCTGTTTATAACTACCTTATCAAGGAAGTTCAGTTTGCATATCGTACTCAAGGTGTTGACATCAACGATAAGCACATTGAGGTTATCGTTCGTCAAATGCTCAAGAAATGCACCGTTGACGATGCAGGCGATACAGACCTTATCGCAGGCACAATGGTTGATGTTTCTGCTGTTGACGAGGCAAACGATGTTATCGACGAAAGACTCGCCGCAGGAGAAGAGGGACTTAAGCACGCAACTTATATTCCGATTCTTATGGGTATCACAAAGGCATCTCTTGCAACAGATTCCTTCCTTTCAGCCGCATCATTCCAGGAAACAACAAGAGTTCTTACAGACGCGGCAATCAAAGGCAAGAGCGATCCGCTCCTCGGACTTAAGGAAAATGTTCTTATCGGTAAACTTATCCCTGCCGGAACAGGTATGGATGTTTTCAGAGATGTTGATGTTGTTCCGAGCTATTTCAGCGCAGAGGGTTCAGACGATATTTTGAATCTTGAGCAACTTCAGGAGCTTTTGACAAACAATATGGCTCAAAGCTCCGACGCAGAAGAGGAAGATAACGGCGACAAAAATTAA
PROTEIN sequence
Length: 1231
MDNNSTNEFSSIKIGLASPERIREWSYGEVTKPETINYRTLKPERDGLFCERIFGPMKDWECHCGKYKRVRYKGKVCERCGVEITRAKVRRERMGHIELAAPVSHIWYFKGIPSRLGLVLDISPRYLEKVLYFALYIVTDPGDTPLEKMQILNEKEYAEMRERYEDDFEAGMGAEAIKKLLQDIDVPTLRDELTAELEDATGQKRVKLLKRLDVVDAFYNSGNKLEWMILDVIPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQESVDALIDNGRRGRPVTGPNNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMAIELFKPFVMKRLVETNVVSNIKAARKMVEKAARPEVWDALEVVIKDHPVMLNRAPTLHRLGIQAFEPVLVEGRAIKLHPLACTAFNADFDGDQMAVHVPLSAEAQAEARMLMLAANNLLKPADGKPVTVPTQDMIIGSYYLTMLKDGEAGCPTVEKDAEGNEYTRYNIYRDTDEAMMAYQQGELGLHSECLIRFSKEKDGKTVSRLVKTTIGRVIFNRPIPQDLGFVDRTNPENEFELEVSFVVKKKQLGQIVDKCIRAHGIAIASKVLDEIKAQGYKYSTISGTTVAVIDALIPEKKKEYLAEAEAKVDEITNHYNFGEMTNDERAEAVIKAWEECTNKVSDELTSNFDGTHNPIHMMVDSGARGSTSQLRQLAGMRGLIANTSGKTIEVPIRANYREGLNILEYFISSRGARKGLTDTALRTADSGYLTRRLVDVSQDVIIRDTDCKCHDGIDVYAVMDGNRVLESLEERLVGRFLVDPVVDPETGEVIMDTDRMMNEQDAKRIVDAGYTHIKIRSLITCKSRHGVCRKCYGSNLAFNEPVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGEDITQGLPRVEELFEARKPKTLAILSEIDGEVRFEEIKKSRHVVVFNSETGEEKKYLIPYGAHLTPQIVEGAHIEKGAEITVGSKNPHDVLAILGKEAVYNYLIKEVQFAYRTQGVDINDKHIEVIVRQMLKKCTVDDAGDTDLIAGTMVDVSAVDEANDVIDERLAAGEEGLKHATYIPILMGITKASLATDSFLSAASFQETTRVLTDAAIKGKSDPLLGLKENVLIGKLIPAGTGMDVFRDVDVVPSYFSAEGSDDILNLEQLQELLTNNMAQSSDAEEEDNGDKN*