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L1_007_000M1_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_7_1
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(2..2572)
DNA (2571bp) protein (857aa)
Cell surface protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BFX4_9FIRM
Cell surface protein {ECO:0000313|EMBL:CDD64023.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
cell surface protein
L1_007_000M1_scaffold_7_2
unknown

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comp(2589..3038)
DNA (450bp) protein (150aa)

This feature has no annotations

L1_007_000M1_scaffold_7_3
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3166..3369
DNA (204bp) protein (68aa)
Putative Xre family DNA-binding protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QSH7_9FIRM
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CDC33761.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
putative Xre family DNA-binding protein
L1_007_000M1_scaffold_7_4
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3442..4212)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y7U6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
sigG; RNA polymerase sigma-G factor
L1_007_000M1_scaffold_7_5
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4410..5840)
DNA (1431bp) protein (477aa)
Uracil-xanthine permease n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XU89_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:CDA12391.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
uracil-xanthine permease
L1_007_000M1_scaffold_7_6
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5889..6521)
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
upp; Uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QSB1_9FIRM
L1_007_000M1_scaffold_7_7
unknown

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comp(6759..7190)
DNA (432bp) protein (144aa)

This feature has no annotations

L1_007_000M1_scaffold_7_8
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7544..10381)
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Clostridium sp. CAG:678 RepID=R5L205_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
uvrA; UvrABC system protein A
L1_007_000M1_scaffold_7_9
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10398..12356)
DNA (1959bp) protein (653aa)
UvrABC system protein B n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XJX3_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
uvrB; UvrABC system protein B
L1_007_000M1_scaffold_7_10
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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12473..13420
DNA (948bp) protein (316aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase RluA family n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BBB4_9FIRM
L1_007_000M1_scaffold_7_11
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

13420..13875
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BBI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62906.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L1_007_000M1_scaffold_7_12
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

comp(13945..14748)
DNA (804bp) protein (268aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZD78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA34554.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
L1_007_000M1_scaffold_7_13
unknown

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comp(14811..15326)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMU3_9CLOT
L1_007_000M1_scaffold_7_14
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(15387..15839)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BFN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64594.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hypothetical protein
L1_007_000M1_scaffold_7_15
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15854..19858)
DNA (4005bp) protein (1335aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000380FCE8
Fibronectin type III domain protein {ECO:0000313|EMBL:CCY61212.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
peptidase S8
L1_007_000M1_scaffold_7_16
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20023..21498
DNA (1476bp) protein (492aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q979_9FIRM
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:CDC33238.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
glycoside/pentoside/hexuronide transporter
L1_007_000M1_scaffold_7_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21672..22865)
DNA (1194bp) protein (398aa)
Elongation factor Tu n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QSF7_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
tuf; elongation factor Tu
L1_007_000M1_scaffold_7_18
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22957..25065)
DNA (2109bp) protein (703aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RGZ5_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L1_007_000M1_scaffold_7_19
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25095..25565)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XB64_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
rpsG; 30S ribosomal protein S7
L1_007_000M1_scaffold_7_20
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25693..26112)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XKC2_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
SSU ribosomal protein S12P
L1_007_000M1_scaffold_7_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26342..30034)
DNA (3693bp) protein (1231aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYP4_9CLOT
L1_007_000M1_scaffold_7_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30089..33844)
DNA (3756bp) protein (1252aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QSG1_9FIRM
L1_007_000M1_scaffold_7_23
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34255..36012
DNA (1758bp) protein (586aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RGZ9_9FIRM
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDC33742.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
ABC-type oligopeptide transport system, periplasmic component
L1_007_000M1_scaffold_7_24
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36053..36460
DNA (408bp) protein (136aa)
VanZ family protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAP3_9FIRM
VanZ family protein {ECO:0000313|EMBL:CDC33743.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
VanZ family protein
L1_007_000M1_scaffold_7_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36523..37248
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQM7_9CLOT
glucosamine-6-phosphate isomerase
L1_007_000M1_scaffold_7_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37250..37765
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51539.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L1_007_000M1_scaffold_7_27
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


37776..39722
DNA (1947bp) protein (649aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NIH4_9FIRM
L1_007_000M1_scaffold_7_28
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39781..40557
DNA (777bp) protein (259aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QSG4_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CDC33746.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L1_007_000M1_scaffold_7_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40847..43732)
DNA (2886bp) protein (962aa)
Putative fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6INT8_9CLOT
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDB50975.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
IgA Peptidase M64./Fibronectin type III domain.
L1_007_000M1_scaffold_7_30
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43908..44837)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XTJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12101.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
alpha/beta hydrolase fold protein
Displaying items 1-30 of 360 in total

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