ggKbase home page

L1_007_000M1_scaffold_1539_29

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(21855..22196)

Top 3 Functional Annotations

Value Algorithm Source
Nucleoid-associated protein SUBVAR_05471 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 113.0
  • Bit_score: 211
  • Evalue 3.10e-52
Nucleoid-associated protein SUBVAR_05471 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 113.0
  • Bit_score: 211
  • Evalue 4.40e-52
conserved hypothetical protein TIGR00103 similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 112.0
  • Bit_score: 174
  • Evalue 1.60e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 342
ATGAAAGCAAGACTGCCCAAAGGCTACGGCCGTCCCGATCCCAACGCCATGATGCGTCAGGTCCAGAAGATGCAGGATGATATCCGCGCCAAACAGGAGGAGCTGGAGGCTAAGGAATATACCGGCACCGCCAGCGGTGAGATGGTCACTGTCACGATGAACGGCAAGCACGAGATCACCGCCGTCAAGATCAAGCCTGAGGCTGTTGATCCGGACGATATCGAGATGCTGGAGGATCTTATCGCAGCTGCTGTCAACAGCGCTTCTTCTGCGGTTGACAAGGACTCCGAGGAGGAAATGTCCAAGATGACCGGCGGTCTGAACATTCCCGGCCTGGGTTGA
PROTEIN sequence
Length: 114
MKARLPKGYGRPDPNAMMRQVQKMQDDIRAKQEELEAKEYTGTASGEMVTVTMNGKHEITAVKIKPEAVDPDDIEMLEDLIAAAVNSASSAVDKDSEEEMSKMTGGLNIPGLG*