ggKbase home page

L1_007_000M1_scaffold_1539

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1539_1
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..138
DNA (138bp) protein (46aa)
Phage uncharacterized protein (Putative large terminase), C-terminal domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNV6_9FIRM
phage uncharacterized protein (putative large terminase), C-terminal domain
Phage uncharacterized protein (Putative large terminase), C-terminal domain {ECO:0000313|EMBL:CBL42491.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

362..1819
DNA (1458bp) protein (486aa)
SPP1 family phage portal protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P563_9CLOT
SPP1 family phage portal protein {ECO:0000313|EMBL:CDC05067.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
portal protein
L1_007_000M1_scaffold_1539_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1931..2518
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNV7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42492.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2518..3444
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNV8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42493.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3463..3780
DNA (318bp) protein (106aa)
Phage QLRG family, putative DNA packaging n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNV9_9FIRM
Phage QLRG family, putative DNA packaging.
Phage QLRG family, putative DNA packaging {ECO:0000313|EMBL:CBL42494.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3777..4184
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42495.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_7
unknown

Not on your lists

comp(4207..4491)
DNA (285bp) protein (95aa)

This feature has no annotations

L1_007_000M1_scaffold_1539_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4540..4710
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P566_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05072.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_007_000M1_scaffold_1539_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4707..5111
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05073.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L1_007_000M1_scaffold_1539_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5118..5543
DNA (426bp) protein (142aa)
Phage tail protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW1_9FIRM
Phage tail protein.
Phage tail protein {ECO:0000313|EMBL:CBL42496.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5569..5898
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42497.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5892..6347
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32977.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1539_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6353..11038
DNA (4686bp) protein (1562aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42498.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11054..11425
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42499.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11438..13660
DNA (2223bp) protein (741aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL42500.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
hypothetical protein
L1_007_000M1_scaffold_1539_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13662..14087
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42501.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14088..14714
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42502.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14717..15619
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42503.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15663..16205
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQP4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40119.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16500..17570
DNA (1071bp) protein (357aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQP5_9FIRM
Reverse transcriptase (RNA-dependent DNA polymerase).
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CBL40120.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17534..17863
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNW9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42504.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_22
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17866..17967
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNX0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42505.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_23
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17970..18146
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNX1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42506.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18210..18536
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDI1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07410.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_000M1_scaffold_1539_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18552..20009
DNA (1458bp) protein (486aa)
Muramidase (Flagellum-specific) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNX2_9FIRM
Muramidase (flagellum-specific)
Muramidase (Flagellum-specific) {ECO:0000313|EMBL:CBL42507.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20151..20417
DNA (267bp) protein (89aa)
Holin, phage phi LC3 family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GNX3_9FIRM
holin, phage phi LC3 family
Holin, phage phi LC3 family {ECO:0000313|EMBL:CBL42508.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_000M1_scaffold_1539_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20735..21175)
DNA (441bp) protein (147aa)
SsrA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMA9_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SsrA-binding protein
L1_007_000M1_scaffold_1539_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21248..21844)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB0_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
recombination protein RecR
L1_007_000M1_scaffold_1539_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21855..22196)
DNA (342bp) protein (114aa)
Nucleoid-associated protein SUBVAR_05471 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB1_9FIRM
Nucleoid-associated protein SUBVAR_05471 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
conserved hypothetical protein TIGR00103
L1_007_000M1_scaffold_1539_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22218..23921)
DNA (1704bp) protein (568aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EFB75697.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFB75697.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB2_9FIRM
Displaying items 1-30 of 62 in total

View Taxonomy