ggKbase home page

L1_007_000M1_scaffold_1184_17

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: comp(18867..19142)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B4AFAA similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 78.0
  • Bit_score: 65
  • Evalue 2.20e-08
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK62713.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 74.0
  • Bit_score: 63
  • Evalue 9.10e-08
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 69.0
  • Bit_score: 55
  • Evalue 5.00e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oscillibacter sp. KLE 1745 → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 276
ATGGTCAATAAGAATAATCAAACAAAAGATAGTATAGCTTTTGAAAAGGAATACGCCGAGTTTGTTATTCGAGTGGGCTTGAAAATTGGATATTATCGCCGGTCAAGAAATATGACACAAGAAGAACTCGCAGAGGCCTCTAATTTAAGTCAGGTATATATTAGTCAATTGGAAGGTACGAATTTTCACTATGCTCCTTCTTTAAAAACTCTTTTACGAATAGGCAAGGCATTAGGTGTTAGTGTATATAAATTTTTAGATGTTGAGAATGATTAG
PROTEIN sequence
Length: 92
MVNKNNQTKDSIAFEKEYAEFVIRVGLKIGYYRRSRNMTQEELAEASNLSQVYISQLEGTNFHYAPSLKTLLRIGKALGVSVYKFLDVEND*