ggKbase home page

L1_007_000M1_scaffold_1321_7

Organism: L1_007_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 17
Location: 5650..6231

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 30 subunit SigH n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWN6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 193.0
  • Bit_score: 342
  • Evalue 1.50e-91
RNA polymerase sigma 30 subunit SigH {ECO:0000313|EMBL:CCY34258.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 193.0
  • Bit_score: 342
  • Evalue 2.20e-91
RNA polymerase, sigma 30 subunit, SigH similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 193.0
  • Bit_score: 266
  • Evalue 3.00e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:60 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 582
ATGGGAAAGTTCGATGGTGTAAGTGATGAAGAACTGATTGCCCGTCTGCGGGCTGGAGAGACAGCCATAGAAGATTATCTGATGGAGAAATATAAGGGGCTGGTGCGTCAGAAAGCCCGGGCCATGTTCCTCATCGGAGGAGATACAGATGACCTGATTCAGGAAGGAATGATCGGTTTGTTTAAAGCAGTCCGGGATTTTCAGACAGATAAGGAGGCATCTTTTGCAACTTTTGCCAGAGTGTGTATTGACAGGCAGATATACAGTGCCATTCAGAATTCTAACCGCCAGAAGCACCAGCCTCTGAATTCCTATGTATCGTTGAATCAGGAGGATGAAAGCAGTCCAATCTGGGAACTGAGCGTGGAGAATCCGGAATCTATCATTATTGATCAGGAGACTACAGAGGATCTTCGGAAAAGAATTTCAGATTATTTAAGTCCTATGGAAAATAAAGTGCTGGATTTGTATCTGAAGGGAAAAGGATATGTTGAAATTGGAGGAATCCTGAATAAATCTCCAAAATCTGTTGATAATGCTCTGCAGAGAATTCGCTCCAAAATCCGCGAGGTAATAAGCTAG
PROTEIN sequence
Length: 194
MGKFDGVSDEELIARLRAGETAIEDYLMEKYKGLVRQKARAMFLIGGDTDDLIQEGMIGLFKAVRDFQTDKEASFATFARVCIDRQIYSAIQNSNRQKHQPLNSYVSLNQEDESSPIWELSVENPESIIIDQETTEDLRKRISDYLSPMENKVLDLYLKGKGYVEIGGILNKSPKSVDNALQRIRSKIREVIS*