ggKbase home page

L1_007_000M1_scaffold_1321

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1321_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41..1543
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EX23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97616.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Beta-lactamase class A
L1_007_000M1_scaffold_1321_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1789..2160
DNA (372bp) protein (124aa)
Endoribonuclease L-PSP putative n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWP2_9FIRM
Endoribonuclease L-PSP putative {ECO:0000313|EMBL:CCY34263.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
endoribonuclease L-PSP, putative
L1_007_000M1_scaffold_1321_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2412..2939
DNA (528bp) protein (176aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBB1_9FIRM
L1_007_000M1_scaffold_1321_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3034..4443
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBU1_9FIRM
L1_007_000M1_scaffold_1321_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4428..4853
DNA (426bp) protein (142aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Mini-ribonuclease 3 n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX01_9FIRM
hypothetical protein
L1_007_000M1_scaffold_1321_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4904..5635
DNA (732bp) protein (244aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34259.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_1321_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5650..6231
DNA (582bp) protein (194aa)
RNA polymerase sigma 30 subunit SigH n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWN6_9FIRM
RNA polymerase sigma 30 subunit SigH {ECO:0000313|EMBL:CCY34258.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
RNA polymerase, sigma 30 subunit, SigH
L1_007_000M1_scaffold_1321_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6763..7200
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34257.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_1321_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7211..7897
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34256.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_1321_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7919..8695
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34255.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_1321_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8685..10094
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34254.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_1321_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10091..10585
DNA (495bp) protein (165aa)
Signal peptidase I n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWM9_9FIRM
Signal peptidase I {ECO:0000313|EMBL:CCY34253.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
signal peptidase I
L1_007_000M1_scaffold_1321_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10587..11222
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34252.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_1321_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11219..15316
DNA (4098bp) protein (1366aa)
Hypothetical Membrane Spanning Protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBT4_9FIRM
Hypothetical Membrane Spanning Protein {ECO:0000313|EMBL:CCY34251.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Cna protein B-type domain.
L1_007_000M1_scaffold_1321_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15811..17478
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutaminyl-tRNA synthetase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVD4_9FIRM
L1_007_000M1_scaffold_1321_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17647..18078)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32053.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_1321_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18231..18833
DNA (603bp) protein (201aa)
Maf-like protein BN729_01143 n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I4Y4_9FIRM
Maf-like protein BN729_01143 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
MAF protein
L1_007_000M1_scaffold_1321_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18830..19498
DNA (669bp) protein (223aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5M8_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCY32051.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_1321_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19567..19824
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32050.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_1321_20
unknown

Not on your lists

19996..20247
DNA (252bp) protein (84aa)

This feature has no annotations

L1_007_000M1_scaffold_1321_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20329..22818
DNA (2490bp) protein (830aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32049.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_1321_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23038..25104
DNA (2067bp) protein (689aa)
Molecular chaperone HSP90 family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQP3_9FIRM
Molecular chaperone HSP90 family {ECO:0000313|EMBL:CCY32048.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Molecular chaperone, HSP90 family
L1_007_000M1_scaffold_1321_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25373..25762
DNA (390bp) protein (130aa)
Sporulation initiation factor Spo0A C terminal n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I4Y2_9FIRM
Sporulation initiation factor Spo0A C terminal {ECO:0000313|EMBL:CCY32047.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Sporulation initiation factor Spo0A C terminal.
L1_007_000M1_scaffold_1321_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25768..26271)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32046.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_1321_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26465..27304
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32045.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
EDD domain protein, DegV family
L1_007_000M1_scaffold_1321_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27600..27857
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32044.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_1321_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28080..28280)
DNA (201bp) protein (67aa)
Cold shock-like protein CspLA n=3 Tax=Ruminococcus RepID=C6JCQ7_9FIRM
Cold shock-like protein CspLA {ECO:0000313|EMBL:EES76956.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cold-shock DNA-binding protein family
L1_007_000M1_scaffold_1321_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28601..29896
DNA (1296bp) protein (432aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I4X7_9FIRM
L1_007_000M1_scaffold_1321_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29943..30869
DNA (927bp) protein (309aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5M0_9FIRM
L1_007_000M1_scaffold_1321_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30880..31662
DNA (783bp) protein (261aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQR2_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Displaying items 1-30 of 48 in total

View Taxonomy