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L1_007_000M1_scaffold_3018

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3018_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..423)
DNA (423bp) protein (141aa)
Citrate transporter n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGM2_9FIRM
Citrate transporter {ECO:0000313|EMBL:EFQ07661.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transporter, YbiR family
L1_007_000M1_scaffold_3018_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1176..1406
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q2Q8_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
acyl carrier protein
L1_007_000M1_scaffold_3018_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1419..2303
DNA (885bp) protein (295aa)
acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395, ECO:0000313|EMBL:CBK99475.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZM6_9FIRM
L1_007_000M1_scaffold_3018_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2300..3259
DNA (960bp) protein (320aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZM5_9FIRM
L1_007_000M1_scaffold_3018_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3256..4209
DNA (954bp) protein (318aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAI2_9FIRM
L1_007_000M1_scaffold_3018_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4206..5144
DNA (939bp) protein (313aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Dioxygenases related to 2-nitropropane dioxygenase {ECO:0000313|EMBL:CBK99472.1}; EC=1.3.1.- {ECO:0000313|EMBL:CBK99472.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Dioxygenases related to 2-nitropropane dioxygenase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZM3_9FIRM
L1_007_000M1_scaffold_3018_7

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5144..6082
DNA (939bp) protein (313aa)
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=human gut metagenome RepID=K1UAR1_9ZZZZ
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:EKC77089.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_3018_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6085..6837
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EFB75842.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EFB75842.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ7_9FIRM
L1_007_000M1_scaffold_3018_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6847..8097
DNA (1251bp) protein (417aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ6_9FIRM
L1_007_000M1_scaffold_3018_10

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8100..8558
DNA (459bp) protein (153aa)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ {ECO:0000313|EMBL:EKC51010.1}; EC=4.2.1.- {ECO:0000313|EMBL:EKC51010.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.-)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=human gut metagenome RepID=K1SBA0_9ZZZZ
L1_007_000M1_scaffold_3018_11

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8623..9066
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family (Fragment) n=1 Tax=human gut metagenome RepID=K1UIU1_9ZZZZ
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EKC79949.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transcriptional regulators
L1_007_000M1_scaffold_3018_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9410..10876)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IL71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51362.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
glycoside hydrolase family protein
L1_007_000M1_scaffold_3018_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11404..13461)
DNA (2058bp) protein (686aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CBL01100.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBL01100.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8D7_9FIRM
L1_007_000M1_scaffold_3018_14
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14903..16534
DNA (1632bp) protein (544aa)
ABC transporter substrate-binding protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000287B278
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABX41496.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_000M1_scaffold_3018_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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16649..17602
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW67_9FIRM
Protein lplB {ECO:0000313|EMBL:KJF40384.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
binding-protein-dependent transport system inner membrane protein
L1_007_000M1_scaffold_3018_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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17616..18488
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW66_9FIRM
binding-protein-dependent transport systems inner membrane component
ABC transporter permease {ECO:0000313|EMBL:KJF40383.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_000M1_scaffold_3018_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18543..19442
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW65_9FIRM
RpiR family transcriptional regulator
L1_007_000M1_scaffold_3018_18
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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19686..20792
DNA (1107bp) protein (369aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (nagA) (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase (NagA) {ECO:0000313|EMBL:ACS32893.1}; EC=3.5.1.25 {ECO:0000313|EMBL:ACS32893.1};; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3).;"
N-acetylglucosamine-6-phosphate deacetylase (NagA) n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A3T1_THEGJ
L1_007_000M1_scaffold_3018_19
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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21229..22089
DNA (861bp) protein (287aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:ABK52752.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ABK52752.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Glucokinase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTJ2_ACIC1
L1_007_000M1_scaffold_3018_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22429..23979
DNA (1551bp) protein (517aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y750_9FIRM
glycoside hydrolase
L1_007_000M1_scaffold_3018_21
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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23994..24731
DNA (738bp) protein (246aa)
Putative esterase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW98_9FIRM
Putative esterase {ECO:0000313|EMBL:CCX92346.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
esterase
L1_007_000M1_scaffold_3018_22

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comp(24997..25596)
DNA (600bp) protein (200aa)
Ig domain-containing protein group 2 domain-containing protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U5X2_9ZZZZ
Ig domain-containing protein group 2 domain-containing protein {ECO:0000313|EMBL:EKC80577.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
surface/cell-adhesion protein
Displaying 22 items

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