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L1_007_000M1_scaffold_1260

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1260_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..308
DNA (306bp) protein (102aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAF3_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDP20561.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Relaxase/Mobilisation nuclease domain.
L1_007_000M1_scaffold_1260_2
unknown

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337..429
DNA (93bp) protein (31aa)

This feature has no annotations

L1_007_000M1_scaffold_1260_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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465..1532
DNA (1068bp) protein (356aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6W6_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL00579.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1260_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1651..1851)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SA32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21908.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_000M1_scaffold_1260_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1855..2799)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45380.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_1260_6

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comp(3199..3870)
DNA (672bp) protein (224aa)
precorrin-8X methylmutase (EC:5.4.1.2)
Putative precorrin8X methylmutase n=1 Tax=uncultured bacterium RepID=S6CPR4_9BACT
Putative precorrin8X methylmutase {ECO:0000313|EMBL:CCG34912.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L1_007_000M1_scaffold_1260_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3867..5375)
DNA (1509bp) protein (503aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXA6_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1260_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5372..6424)
DNA (1053bp) protein (351aa)
L-threonine-O-3-phosphate decarboxylase (EC:4.1.1.81)
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:CBL03000.1}; EC=4.1.1.81 {ECO:0000313|EMBL:CBL03000.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5Z1_9FIRM
L1_007_000M1_scaffold_1260_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6446..7408)
DNA (963bp) protein (321aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K375_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_1260_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7402..8001)
DNA (600bp) protein (200aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73 5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFV7_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDP20081.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_1260_11

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comp(7995..8312)
DNA (318bp) protein (106aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase n=1 Tax=human gut metagenome RepID=K1SDA0_9ZZZZ
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:EKC58712.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
L1_007_000M1_scaffold_1260_12

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comp(8314..9066)
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=uncultured bacterium RepID=S6CQ57_9BACT
L1_007_000M1_scaffold_1260_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9063..9596)
DNA (534bp) protein (178aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXB9_9FIRM
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:CDC29028.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1260_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9590..10654)
DNA (1065bp) protein (355aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9A5_9FIRM
L1_007_000M1_scaffold_1260_15
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10651..12009)
DNA (1359bp) protein (453aa)
cobyrinic acid a,c-diamide synthase (EC:6.3.5.9)
Cobyrinic acid a c-diamide synthase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXC5_9FIRM
Cobyrinic acid a c-diamide synthase {ECO:0000313|EMBL:CDC29033.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1260_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12012..13208)
DNA (1197bp) protein (399aa)
precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit (EC:1.-.-.- 2.1.1.132)
Precorrin-6y C5 15-methyltransferase (Decarboxylating) CbiE subunit/precorrin-6Y C5 15-methyltransferase (Decarboxylating) CbiT subunit n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QDY1_9FIRM
Precorrin-6y C5 15-methyltransferase (Decarboxylating) CbiE subunit/precorrin-6Y C5 15-methyltransferase (Decarboxylating) CbiT subunit {ECO:0000313|EMBL:CDC29036.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1260_17

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comp(13205..13939)
DNA (735bp) protein (245aa)
precorrin-6x reductase (EC:1.3.1.54)
Precorrin6x reductase n=1 Tax=uncultured bacterium RepID=S6CQ58_9BACT
Precorrin6x reductase {ECO:0000313|EMBL:CCG34923.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L1_007_000M1_scaffold_1260_18
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13936..14676)
DNA (741bp) protein (247aa)
precorrin-3 methyltransferase (EC:2.1.1.131)
Precorrin-3 methyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZU1_9FIRM
Precorrin-3 methyltransferase {ECO:0000313|EMBL:CDC29040.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1260_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14666..15670)
DNA (1005bp) protein (335aa)
CbiG n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJM4_9FIRM
CbiG {ECO:0000313|EMBL:EFQ06627.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Cobalamin biosynthesis protein CbiG
L1_007_000M1_scaffold_1260_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15667..16425)
DNA (759bp) protein (253aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:CBL03012.1}; EC=2.1.1.133 {ECO:0000313|EMBL:CBL03012.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Precorrin-4 C11-methyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K603_9FIRM
L1_007_000M1_scaffold_1260_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16429..18390)
DNA (1962bp) protein (654aa)
Cobalamin biosynthesis protein CbiD n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9B2_9FIRM
Cobalamin biosynthesis protein CbiD {ECO:0000313|EMBL:EEU95461.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
cobalamin biosynthesis protein CbiD
L1_007_000M1_scaffold_1260_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18387..19403)
DNA (1017bp) protein (339aa)
ABC-type Fe3+-siderophore transport system permease component n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PXD7_9FIRM
ABC-type Fe3+-siderophore transport system permease component {ECO:0000313|EMBL:CDC29048.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_007_000M1_scaffold_1260_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19427..20560)
DNA (1134bp) protein (378aa)
Periplasmic binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJM9_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EFQ06632.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_007_000M1_scaffold_1260_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20560..21456)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K361_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97954.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_1260_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21936..23192)
DNA (1257bp) protein (419aa)
Cobalamin biosynthesis protein CbiK, Co2+ chelatase (EC:4.99.1.3)
Cobalamin biosynthesis protein CbiK, Co2+ chelatase {ECO:0000313|EMBL:CBL03017.1}; EC=4.99.1.3 {ECO:0000313|EMBL:CBL03017.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Cobalamin biosynthesis protein CbiK, Co2+ chelatase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K608_9FIRM
L1_007_000M1_scaffold_1260_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24060..25397
DNA (1338bp) protein (446aa)
amino acid:sodium symporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030C0F8C
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sodium:neurotransmitter symporter
L1_007_000M1_scaffold_1260_27

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25691..26359
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB (Fragment) n=1 Tax=human gut metagenome RepID=K1SK80_9ZZZZ
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EKC57993.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hydrogenase accessory protein HypB
L1_007_000M1_scaffold_1260_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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26438..29209
DNA (2772bp) protein (924aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74198.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L1_007_000M1_scaffold_1260_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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29210..29581
DNA (372bp) protein (124aa)
Hydrogenase nickel insertion protein HypA n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ21_9FIRM
Hydrogenase nickel incorporation protein HypA {ECO:0000313|EMBL:KJF38360.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hydrogenase nickel incorporation protein HypA
L1_007_000M1_scaffold_1260_30
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29703..31085
DNA (1383bp) protein (461aa)
Putative efflux protein, MATE family n=1 Tax=Coprococcus catus GD/7 RepID=D4JAK1_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK81372.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Displaying items 1-30 of 86 in total

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