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L1_007_000M1_scaffold_1263

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Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1263_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(181..789)
DNA (609bp) protein (203aa)
Protein GrpE n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEK8_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Molecular chaperone GrpE (heat shock protein)
L1_007_000M1_scaffold_1263_2

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comp(786..1808)
DNA (1023bp) protein (341aa)
Heat-inducible transcription repressor HrcA (Fragment) n=1 Tax=human gut metagenome RepID=K1RKE7_9ZZZZ
Heat-inducible transcription repressor HrcA {ECO:0000313|EMBL:EKC45913.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
heat shock gene repressor HrcA
L1_007_000M1_scaffold_1263_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2048..2590)
DNA (543bp) protein (181aa)
Putative stage V sporulation protein T n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR9_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:EFB77017.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcriptional regulator, AbrB family
L1_007_000M1_scaffold_1263_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2962..3444
DNA (483bp) protein (161aa)
Mutator MutT protein {ECO:0000313|EMBL:EFB77016.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFB77016.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Mutator MutT protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJR8_9FIRM
L1_007_000M1_scaffold_1263_5

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comp(3705..4490)
DNA (786bp) protein (262aa)
Cof-like hydrolase (Fragment) n=1 Tax=human gut metagenome RepID=K1SIM2_9ZZZZ
Cof-like hydrolase {ECO:0000313|EMBL:EKC53590.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
haloacid dehalogenase-like hydrolase
L1_007_000M1_scaffold_1263_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4495..5505)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ96_9FIRM
L1_007_000M1_scaffold_1263_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5676..6338)
DNA (663bp) protein (221aa)
Ser/Thr phosphatase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ95_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFB77255.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted phosphoesterases, related to the Icc protein
L1_007_000M1_scaffold_1263_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6335..8299)
DNA (1965bp) protein (655aa)
Basic membrane protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ94_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EFB77254.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
nucleoside-binding protein
L1_007_000M1_scaffold_1263_9

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8539..9018
DNA (480bp) protein (160aa)
Small multidrug export related protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TY36_9ZZZZ
Small multidrug export related protein {ECO:0000313|EMBL:EKC64161.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
small multi-drug export
L1_007_000M1_scaffold_1263_10

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comp(9081..9899)
DNA (819bp) protein (273aa)
ABC-type uncharacterized transport system, ATPase component (Fragment) n=1 Tax=human gut metagenome RepID=K1RVF8_9ZZZZ
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:EKC52472.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type uncharacterized transport system, ATPase component
L1_007_000M1_scaffold_1263_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9892..10809)
DNA (918bp) protein (306aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJA4_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFB77264.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1263_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11011..12054)
DNA (1044bp) protein (348aa)
ABC transporter substrate binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJA3_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:EFB77263.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1263_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12538..14979)
DNA (2442bp) protein (814aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJA0_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EFB77260.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
erythromycin esterase-like protein
L1_007_000M1_scaffold_1263_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14988..16325)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77259.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1263_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16465..17637)
DNA (1173bp) protein (391aa)
Putative cell division protein FtsW n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ98_9FIRM
Putative cell division protein FtsW {ECO:0000313|EMBL:EFB77258.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cell division protein FtsW
L1_007_000M1_scaffold_1263_16

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comp(17895..20078)
DNA (2184bp) protein (728aa)
Competence/damage-inducible protein cinA (Fragment) n=1 Tax=human gut metagenome RepID=K1SQB5_9ZZZZ
Competence/damage-inducible protein cinA {ECO:0000313|EMBL:EKC59763.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Competence-damaged protein.
L1_007_000M1_scaffold_1263_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20241..21551)
DNA (1311bp) protein (437aa)
Putative competence-damage inducible protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNF2_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
competence/damage-inducible protein cinA
L1_007_000M1_scaffold_1263_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21597..22790)
DNA (1194bp) protein (398aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Probable tRNA sulfurtransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNF3_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L1_007_000M1_scaffold_1263_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22848..24014)
DNA (1167bp) protein (389aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Aminotransferase, class V n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNF4_9FIRM
Aminotransferase, class V {ECO:0000313|EMBL:EFB76089.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1263_20

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comp(24351..25082)
DNA (732bp) protein (244aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SEQ9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC52075.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1263_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25116..26129)
DNA (1014bp) protein (338aa)
4Fe-4S binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNF5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFB76090.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_007_000M1_scaffold_1263_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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26345..27145
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNF6_9FIRM
L1_007_000M1_scaffold_1263_23

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27145..27915
DNA (771bp) protein (257aa)
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase (Fragment) n=1 Tax=human gut metagenome RepID=K1TFM5_9ZZZZ
Glutamate 5-kinase {ECO:0000313|EMBL:EKC58026.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1263_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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28101..29393
DNA (1293bp) protein (431aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNF8_9FIRM
L1_007_000M1_scaffold_1263_25

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comp(29805..30923)
DNA (1119bp) protein (373aa)
Membrane protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RHD8_9ZZZZ
Membrane protein {ECO:0000313|EMBL:EKC48007.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1263_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31419..33131
DNA (1713bp) protein (571aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H686_9FIRM
L1_007_000M1_scaffold_1263_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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33378..33941
DNA (564bp) protein (188aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNG0_9FIRM
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:EFB76095.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
probable proton-coupled thiamine transporter YuaJ
L1_007_000M1_scaffold_1263_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34532..36016
DNA (1485bp) protein (495aa)
Putative PTS system, N-acetylglucosamine-specific IIBC component n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1G9_9FIRM
Putative PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EEU98179.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L1_007_000M1_scaffold_1263_29

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36233..36715
DNA (483bp) protein (161aa)
Protein containing Phosphotransferase system EIIB/cysteine phosphorylation site domain protein {ECO:0000313|EMBL:EKC48175.1}; EC=2.7.1.- {ECO:0000313|EMBL:EKC48175.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein containing Phosphotransferase system EIIB/cysteine phosphorylation site domain protein n=1 Tax=human gut metagenome RepID=K1S3B9_9ZZZZ
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L1_007_000M1_scaffold_1263_30

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36896..37627
DNA (732bp) protein (244aa)
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=human gut metagenome RepID=K1SZX0_9ZZZZ
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:EKC59355.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 113 in total

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