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L1_007_000M1_scaffold_1320

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1320_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111..1001
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41018.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L1_007_000M1_scaffold_1320_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1298..1996
DNA (699bp) protein (233aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2P0_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDC40897.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Bacterial regulatory proteins, tetR family.
L1_007_000M1_scaffold_1320_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2051..3160
DNA (1110bp) protein (370aa)
Penicillin V acylase-like amidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I460_9FIRM
Penicillin V acylase-like amidase {ECO:0000313|EMBL:CDE46674.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Penicillin V acylase-like amidase
L1_007_000M1_scaffold_1320_4

Not on your lists

3292..4137
DNA (846bp) protein (282aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EKC59039.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EKC59039.1};; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase (Fragment) n=1 Tax=human gut metagenome RepID=K1SUC3_9ZZZZ
L1_007_000M1_scaffold_1320_5
unknown

Not on your lists

4243..4734
DNA (492bp) protein (164aa)

This feature has no annotations

L1_007_000M1_scaffold_1320_6
unknown

Not on your lists

4816..4965
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_000M1_scaffold_1320_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5173..5787)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L7A0_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX22294.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L1_007_000M1_scaffold_1320_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6385..6861
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R825_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30607.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_007_000M1_scaffold_1320_9
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7672..8967
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Enolase n=1 Tax=Clostridium sp. CAG:632 RepID=R5JSW6_9CLOT
enolase
L1_007_000M1_scaffold_1320_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9103..9678)
DNA (576bp) protein (192aa)
Chromate transport protein ChrA n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7E6_9FIRM
Chromate transport protein ChrA
Chromate transport protein ChrA {ECO:0000313|EMBL:CBL00759.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1320_11

Not on your lists

comp(9675..9791)
DNA (117bp) protein (39aa)
Chromate transport protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SIV0_9ZZZZ
Chromate transport protein {ECO:0000313|EMBL:EKC57498.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1320_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9791..10243)
DNA (453bp) protein (151aa)
Chromate transport protein ChrA n=2 Tax=Faecalibacterium prausnitzii RepID=D4K7E5_9FIRM
Chromate transport protein ChrA
Chromate transport protein ChrA {ECO:0000313|EMBL:CBL00758.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1320_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11408..12874
DNA (1467bp) protein (489aa)
arginine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC9_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFB74414.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1320_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13055..13912
DNA (858bp) protein (286aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD0_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1320_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13912..14766
DNA (855bp) protein (285aa)
Agmatinase {ECO:0000313|EMBL:EFB74416.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EFB74416.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD1_9FIRM
L1_007_000M1_scaffold_1320_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14939..16198
DNA (1260bp) protein (420aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:EFB74417.1}; EC=1.5.1.7 {ECO:0000313|EMBL:EFB74417.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD2_9FIRM
L1_007_000M1_scaffold_1320_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16198..17409
DNA (1212bp) protein (404aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Putative carboxynorspermidine decarboxylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD3_9FIRM
Putative carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EFB74418.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1320_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17933..18892)
DNA (960bp) protein (320aa)
K+-dependent Na+/Ca+ exchanger related-protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAX6_9FIRM
K+-dependent Na+/Ca+ exchanger related-protein
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDP22062.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_1320_19
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19188..19430)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JGY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY53853.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
MATE family efflux protein
L1_007_000M1_scaffold_1320_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(19911..20198)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZJ40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14665.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L1_007_000M1_scaffold_1320_21
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20350..21492
DNA (1143bp) protein (381aa)
Transposase and inactivated derivatives n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTH6_9FIRM
Transposase and inactivated derivatives {ECO:0000313|EMBL:CDE18135.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Transposase and inactivated derivatives
L1_007_000M1_scaffold_1320_22
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22285..22500
DNA (216bp) protein (72aa)
Divergent AAA domain protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y0E1_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:ESL02443.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
putative transcriptional regulator
L1_007_000M1_scaffold_1320_23
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22442..22834
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SXH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP25377.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
putative transcriptional regulator
L1_007_000M1_scaffold_1320_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22891..23451)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57328.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_007_000M1_scaffold_1320_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23460..25874)
DNA (2415bp) protein (805aa)
glycosyl hydrolase family 2 (EC:3.2.1.31)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57329.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L1_007_000M1_scaffold_1320_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25916..26317)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E1NAI8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40522.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_007_000M1_scaffold_1320_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26335..29361)
DNA (3027bp) protein (1009aa)
bgl5; beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E1NAI7_9BIFI
Glycoside hydrolase, family 3, N-terminal domain protein {ECO:0000313|EMBL:ETO98384.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_007_000M1_scaffold_1320_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29577..30890)
DNA (1314bp) protein (438aa)
Putative sensor histidine kinase VirS n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1B0_9FIRM
Putative sensor histidine kinase VirS {ECO:0000313|EMBL:EDM97802.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_000M1_scaffold_1320_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30890..31597)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97801.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_1320_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32042..32440
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF39257.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Displaying items 1-30 of 38 in total

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