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L1_007_000M1_scaffold_1677

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1677_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1411)
DNA (1410bp) protein (470aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EFB77465.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFB77465.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIV6_9FIRM
L1_007_000M1_scaffold_1677_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1918..3093
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77463.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000M1_scaffold_1677_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3175..4380)
DNA (1206bp) protein (402aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFB77462.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFB77462.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIV3_9FIRM
L1_007_000M1_scaffold_1677_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4664..5509
DNA (846bp) protein (282aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
4-deoxy-L-threo-5-hexulose uronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q6W5_9FIRM
L1_007_000M1_scaffold_1677_5

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5659..6474
DNA (816bp) protein (272aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Gluconate 5-dehydrogenase (Fragment) n=1 Tax=human gut metagenome RepID=K1U6Y3_9ZZZZ
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EKC67246.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1677_6
unknown

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7274..7507
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_000M1_scaffold_1677_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7500..8945
DNA (1446bp) protein (482aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCC9_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ96171.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
integrase protein
L1_007_000M1_scaffold_1677_8
unknown

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comp(9701..10645)
DNA (945bp) protein (315aa)

This feature has no annotations

L1_007_000M1_scaffold_1677_9
unknown

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comp(10635..10916)
DNA (282bp) protein (94aa)

This feature has no annotations

L1_007_000M1_scaffold_1677_10

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10967..11221
DNA (255bp) protein (85aa)
Integrase family protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S1L7_9ZZZZ
Integrase family protein {ECO:0000313|EMBL:EKC47580.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1677_11
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11345..11941
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WSD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL13526.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
hypothetical protein
L1_007_000M1_scaffold_1677_12

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11938..12819
DNA (882bp) protein (294aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TCH7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC56916.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Domain of unknown function (DUF1814).
L1_007_000M1_scaffold_1677_13
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(13570..14907)
DNA (1338bp) protein (446aa)
Polygalacturonase {ECO:0000313|EMBL:KFI53782.1}; EC=3.2.1.15 {ECO:0000313|EMBL:KFI53782.1};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XDK1_9CLOT
polygalacturonase
L1_007_000M1_scaffold_1677_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14918..16606)
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369A366
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL00251.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_1677_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16599..18113)
DNA (1515bp) protein (505aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=D3AB47_9CLOT
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:CCZ61677.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_1677_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18107..19966)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4K5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97779.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sensor with HAMP domain
L1_007_000M1_scaffold_1677_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20045..20911)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W462_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97780.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sugar permease
L1_007_000M1_scaffold_1677_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20911..21798)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQ99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97781.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter permease
L1_007_000M1_scaffold_1677_19
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21902..23269)
DNA (1368bp) protein (456aa)
ABC transporter, solute-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLM2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EET58486.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter substrate-binding protein
L1_007_000M1_scaffold_1677_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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23612..24892
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PI90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77558.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein DUF4038
L1_007_000M1_scaffold_1677_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24886..26040
DNA (1155bp) protein (385aa)
Unsaturated glucuronyl hydrolase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TXT0_9CLOT
Unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:CCZ61687.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycosyl hydrolase family 88
L1_007_000M1_scaffold_1677_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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26053..28137
DNA (2085bp) protein (695aa)
Alpha-galactosidase {ECO:0000313|EMBL:KFI91579.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KFI91579.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Gardnerella vaginalis 0288E RepID=I4LMI4_GARVA
L1_007_000M1_scaffold_1677_23
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28141..29736
DNA (1596bp) protein (532aa)
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:KFI53788.1}; EC=3.2.1.37 {ECO:0000313|EMBL:KFI53788.1};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Xylan 1,4-beta-xylosidase n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4J2H2_BIFAP
L1_007_000M1_scaffold_1677_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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29752..30693
DNA (942bp) protein (314aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
ROK family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S7B4_9FIRM
ROK family protein {ECO:0000313|EMBL:CCZ46724.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L1_007_000M1_scaffold_1677_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30697..31488
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S8Z0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22288.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_1677_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31493..31948
DNA (456bp) protein (152aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase, type 1 {ECO:0000313|EMBL:CBL01966.1}; EC=5.3.1.8 {ECO:0000313|EMBL:CBL01966.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Mannose-6-phosphate isomerase, type 1 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAV3_9FIRM
L1_007_000M1_scaffold_1677_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31929..32279
DNA (351bp) protein (117aa)
mannose-6-phosphate isomerase, type 1 (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EDP22112.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EDP22112.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Mannose-6-phosphate isomerase, class I n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9U8_9FIRM
L1_007_000M1_scaffold_1677_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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33196..33429
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B50B3C
Uncharacterized protein {ECO:0000313|EMBL:CCZ46000.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
HTH domain-containing protein
L1_007_000M1_scaffold_1677_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33483..34919
DNA (1437bp) protein (479aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCC9_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ96171.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
integrase protein
L1_007_000M1_scaffold_1677_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35932..36951)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MGT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54099.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Abi family protein
Displaying items 1-30 of 41 in total

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