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L1_007_000M1_scaffold_1703

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1703_1
unknown

Not on your lists

614..763
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_000M1_scaffold_1703_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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766..1821
DNA (1056bp) protein (352aa)
YqaJ viral recombinase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2S3_9CLOT
YqaJ viral recombinase family protein {ECO:0000313|EMBL:EEG54370.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
phage-type endonuclease
L1_007_000M1_scaffold_1703_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1841..4129
DNA (2289bp) protein (763aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
RecD/TraA family helicase (EC:3.1.11.5)
Putative helicase, RecD/TraA family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P898_9FIRM
L1_007_000M1_scaffold_1703_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4157..5140
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61607.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_007_000M1_scaffold_1703_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5162..6289
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54367.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L1_007_000M1_scaffold_1703_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6360..7127
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98645.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_000M1_scaffold_1703_7
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7124..9136
DNA (2013bp) protein (671aa)
Uncharacterized protein n=2 Tax=Eubacterium sp. 14-2 RepID=S0JJV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT28785.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L1_007_000M1_scaffold_1703_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9156..9356
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93224.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_007_000M1_scaffold_1703_9
unknown

Not on your lists

9353..9559
DNA (207bp) protein (69aa)

This feature has no annotations

L1_007_000M1_scaffold_1703_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10075..11073
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61157.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L1_007_000M1_scaffold_1703_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11123..12085
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61158.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L1_007_000M1_scaffold_1703_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12571..14874
DNA (2304bp) protein (768aa)
Peptidase M20/M25/M40 family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H086_9FIRM
Peptidase M20/M25/M40 family {ECO:0000313|EMBL:CDB27379.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_007_000M1_scaffold_1703_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14957..15172)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77578.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1703_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15314..16171
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03840.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1703_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16178..16498
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98612.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_007_000M1_scaffold_1703_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16569..17084)
DNA (516bp) protein (172aa)
Transporter, major facilitator family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGG7_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDP20266.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_007_000M1_scaffold_1703_17

Not on your lists

comp(17081..17188)
DNA (108bp) protein (36aa)
beta-galactosidase (EC:3.2.1.23)
Sugar (Glycoside-Pentoside-Hexuronide) transporter (Fragment) n=1 Tax=human gut metagenome RepID=K1U1Q4_9ZZZZ
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EKC73854.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1703_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17375..18238
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3E2_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU97622.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_1703_19
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18296..20164
DNA (1869bp) protein (623aa)
KAP family P-loop domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLY6_9FIRM
KAP family P-loop domain protein {ECO:0000313|EMBL:EET58349.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
KAP P-loop domain-containing protein
L1_007_000M1_scaffold_1703_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20293..20790)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZ88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29778.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_007_000M1_scaffold_1703_21
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(20796..21605)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6C0S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA65056.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L1_007_000M1_scaffold_1703_22
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(21590..21898)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6C0S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA65056.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L1_007_000M1_scaffold_1703_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21879..22307)
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3P1_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CBK98134.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000M1_scaffold_1703_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22587..22970)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55603.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_000M1_scaffold_1703_25
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23023..24831)
DNA (1809bp) protein (603aa)
Cna B domain protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FKP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37065.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Cna protein B-type domain.
L1_007_000M1_scaffold_1703_26
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24783..30065)
DNA (5283bp) protein (1761aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39253.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cna protein B-type domain.
L1_007_000M1_scaffold_1703_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30110..30877)
DNA (768bp) protein (256aa)
Putative sortase, SrtB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL6_9FIRM
Putative sortase, SrtB family {ECO:0000313|EMBL:EFB74302.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1703_28
unknown

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comp(30874..31275)
DNA (402bp) protein (134aa)

This feature has no annotations

L1_007_000M1_scaffold_1703_29
unknown

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comp(31289..31429)
DNA (141bp) protein (47aa)

This feature has no annotations

L1_007_000M1_scaffold_1703_30
unknown

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comp(31413..32216)
DNA (804bp) protein (268aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy