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L1_007_000M1_scaffold_1751

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1751_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..841
DNA (840bp) protein (280aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=2 Tax=Faecalibacterium prausnitzii RepID=D4KCZ0_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EDP22522.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_1751_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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845..1600
DNA (756bp) protein (252aa)
X-Pro dipeptidyl-peptidase (S15 family) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCY9_9FIRM
X-Pro dipeptidyl-peptidase (S15 family).
X-Pro dipeptidyl-peptidase (S15 family) {ECO:0000313|EMBL:CBL02702.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1751_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1631..3556
DNA (1926bp) protein (642aa)
NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCY8_9FIRM
NADH:flavin oxidoreductases, Old Yellow Enzyme family {ECO:0000313|EMBL:CBL02701.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L1_007_000M1_scaffold_1751_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4183..5142)
DNA (960bp) protein (320aa)
K+-dependent Na+/Ca+ exchanger family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8I1_9FIRM
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDP22525.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
K+-dependent Na+/Ca+ exchanger related-protein
L1_007_000M1_scaffold_1751_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5384..6193)
DNA (810bp) protein (270aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCY6_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL02699.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1751_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6891..7526)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B3T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ31319.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_000M1_scaffold_1751_7

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comp(7530..7859)
DNA (330bp) protein (110aa)
TfoX domain-containing protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TV72_9ZZZZ
TfoX domain-containing protein {ECO:0000313|EMBL:EKC70095.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
TfoX domain-containing protein
L1_007_000M1_scaffold_1751_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8164..9834
DNA (1671bp) protein (557aa)
Repeat protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG1_9FIRM
Repeat protein {ECO:0000313|EMBL:EFB76819.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
FecR protein
L1_007_000M1_scaffold_1751_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9870..11645
DNA (1776bp) protein (592aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76820.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_1751_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11864..13204)
DNA (1341bp) protein (447aa)
Polysaccharide biosynthesis protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG3_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFB76821.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_007_000M1_scaffold_1751_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13514..14338
DNA (825bp) protein (275aa)
ATPases involved in chromosome partitioning n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBX5_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL02338.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1751_12
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14431..14847
DNA (417bp) protein (139aa)
Large conductance mechanosensitive channel protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MPY5_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
mscL; Large-conductance mechanosensitive channel
L1_007_000M1_scaffold_1751_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14959..19686
DNA (4728bp) protein (1576aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Class II glutamine amidotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG6_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:EFB76824.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1751_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19701..21182
DNA (1482bp) protein (494aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.13 1.4.1.14)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFB76825.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1751_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21295..21531)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LZ30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63601.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_007_000M1_scaffold_1751_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21625..22311)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75736.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Uncharacterised protein family (UPF0153).
L1_007_000M1_scaffold_1751_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22308..23294)
DNA (987bp) protein (329aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFB75735.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFB75735.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF0_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
L1_007_000M1_scaffold_1751_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23353..24150)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75734.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Esterase/lipase
L1_007_000M1_scaffold_1751_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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24375..26279
DNA (1905bp) protein (635aa)
Chaperone protein HtpG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME7_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Molecular chaperone, HSP90 family
L1_007_000M1_scaffold_1751_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26466..26900)
DNA (435bp) protein (145aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF2_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_1751_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26937..27845)
DNA (909bp) protein (303aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H416_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_1751_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27842..28561)
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF3_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB75738.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
two component transcriptional regulator, winged helix family
L1_007_000M1_scaffold_1751_23
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28722..29381
DNA (660bp) protein (220aa)
ABC transporter ATP-binding protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LVR9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB78067.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
ABC-type multidrug transport system, ATPase component
L1_007_000M1_scaffold_1751_24
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29359..30087
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6L7D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78066.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L1_007_000M1_scaffold_1751_25

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30091..30828
DNA (738bp) protein (246aa)
Permease (Fragment) n=1 Tax=human gut metagenome RepID=K1SB97_9ZZZZ
Permease {ECO:0000313|EMBL:EKC54688.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1751_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31179..32126
DNA (948bp) protein (316aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMV6_9FIRM
L1_007_000M1_scaffold_1751_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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32120..32548
DNA (429bp) protein (143aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:EFB75892.1}; EC=2.1.3.2 {ECO:0000313|EMBL:EFB75892.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMV7_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
L1_007_000M1_scaffold_1751_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32731..33714
DNA (984bp) protein (328aa)
Predicted dehydrogenases and related proteins n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8E6_9FIRM
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL01109.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1751_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33817..35208)
DNA (1392bp) protein (464aa)
MBOAT family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB0_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EFB76768.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
membrane bound O-acyl transferase MBOAT family protein
L1_007_000M1_scaffold_1751_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35208..36329)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76769.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying items 1-30 of 38 in total

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