ggKbase home page

L1_007_000M1_scaffold_1830

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1830_1

Not on your lists

2..601
DNA (600bp) protein (200aa)
WGR domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T5N9_9ZZZZ
WGR domain protein {ECO:0000313|EMBL:EKC64973.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1830_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

704..1654
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77056.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Type IV secretory pathway, VirD4 components
L1_007_000M1_scaffold_1830_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1651..2547
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI00036A2302
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76931.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000M1_scaffold_1830_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2540..3376
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=root RepID=R5N046_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90966.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L1_007_000M1_scaffold_1830_5
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3391..4023
DNA (633bp) protein (211aa)
ABC transporter related protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CCI3_9ACTN
ABC transporter related protein {ECO:0000313|EMBL:CDD75914.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
ABC transporter-like protein
L1_007_000M1_scaffold_1830_6
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4038..4682
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9K5_ATOPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV50793.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L1_007_000M1_scaffold_1830_7
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4878..6662
DNA (1785bp) protein (595aa)
Xenobiotic-transporting ATPase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9E7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ69736.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
L1_007_000M1_scaffold_1830_8
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6686..8254
DNA (1569bp) protein (523aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9E4_9CLOT
Radical SAM additional 4Fe4S-binding SPASM domain protein {ECO:0000313|EMBL:KFM94994.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Fe-S oxidoreductase
L1_007_000M1_scaffold_1830_9
unknown

Not on your lists

comp(8149..8643)
DNA (495bp) protein (165aa)

This feature has no annotations

L1_007_000M1_scaffold_1830_10
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8594..9925)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BW12_9FIRM
integral membrane sensor signal transduction histidine kinase
L1_007_000M1_scaffold_1830_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9909..10592)
DNA (684bp) protein (228aa)
Putative response regulator MprA n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B7M4_9CLOT
Putative response regulator MprA {ECO:0000313|EMBL:ERI67793.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_1830_12

Not on your lists

10689..12920
DNA (2232bp) protein (744aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SDM2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC55583.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type sugar transport system, periplasmic component
L1_007_000M1_scaffold_1830_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12904..13806
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX55_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:KJF40866.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_1830_14

Not on your lists

13799..14662
DNA (864bp) protein (288aa)
Sugar ABC transporter permease (Fragment) n=1 Tax=human gut metagenome RepID=K1SGV0_9ZZZZ
Sugar ABC transporter permease {ECO:0000313|EMBL:EKC52960.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_1830_15

Not on your lists

14659..16146
DNA (1488bp) protein (496aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TR48_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC61846.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RND family efflux transporter MFP subunit
L1_007_000M1_scaffold_1830_16

Not on your lists

16139..17212
DNA (1074bp) protein (358aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U7K9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC74285.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 16 items

View Taxonomy