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L1_007_000M1_scaffold_1869

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1869_1

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comp(150..2375)
DNA (2226bp) protein (742aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleosidetriphosphate reductase (Fragment) n=2 Tax=root RepID=S6CQ20_9BACT
Anaerobic ribonucleosidetriphosphate reductase {ECO:0000313|EMBL:CCG05881.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L1_007_000M1_scaffold_1869_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2783..3331
DNA (549bp) protein (183aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPU1_9FIRM
L1_007_000M1_scaffold_1869_3
Aspergillus niger, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

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3504..3998
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7) RepID=G3XTK5_ASPNA
Uncharacterized protein {ECO:0000313|EMBL:EHA26777.1}; TaxID=380704 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.;" source="Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB; Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7).;"
OmpA/MotB protein
L1_007_000M1_scaffold_1869_4

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comp(4762..5625)
DNA (864bp) protein (288aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RPE8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC47228.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein of unknown function (DUF2899).
L1_007_000M1_scaffold_1869_5

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comp(5716..6132)
DNA (417bp) protein (139aa)
ISPg7, transposase n=1 Tax=human gut metagenome RepID=K1UGH1_9ZZZZ
ISPg7, transposase {ECO:0000313|EMBL:EKC79104.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1869_6

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comp(6150..10070)
DNA (3921bp) protein (1307aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UKG1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78580.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Cation transport ATPase
L1_007_000M1_scaffold_1869_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10115..10927)
DNA (813bp) protein (271aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJQ0_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFB76998.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1869_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11485..13275)
DNA (1791bp) protein (597aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNX3_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFB75469.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Cell division protein FtsI/penicillin-binding protein 2
L1_007_000M1_scaffold_1869_9
unknown

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comp(13372..14091)
DNA (720bp) protein (240aa)

This feature has no annotations

L1_007_000M1_scaffold_1869_10

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14219..15022
DNA (804bp) protein (268aa)
HAD-superfamily hydrolase, subfamily IIB (Fragment) n=2 Tax=human gut metagenome RepID=K1TUK3_9ZZZZ
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EKC62986.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_1869_11

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15019..15543
DNA (525bp) protein (175aa)
G:T/U mismatch-specific DNA glycosylase n=2 Tax=human gut metagenome RepID=K1U7E4_9ZZZZ
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:EKC81182.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
G:T/U mismatch-specific DNA glycosylase
L1_007_000M1_scaffold_1869_12

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15691..16317
DNA (627bp) protein (209aa)
Uncharacterized protein (Fragment) n=2 Tax=human gut metagenome RepID=K1RKM6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC44084.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L1_007_000M1_scaffold_1869_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16366..17544
DNA (1179bp) protein (393aa)
Toxic anion resistance protein TelA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNW8_9FIRM
Toxic anion resistance protein TelA {ECO:0000313|EMBL:EFB75464.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Uncharacterized protein involved in tellurite resistance
L1_007_000M1_scaffold_1869_14

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17592..18233
DNA (642bp) protein (214aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TIB2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC66005.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1869_15

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18255..19310
DNA (1056bp) protein (352aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TF06_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC66004.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1869_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19933..20763)
DNA (831bp) protein (277aa)
Cobalt transport protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4R2_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EEU97098.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L1_007_000M1_scaffold_1869_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20753..22477)
DNA (1725bp) protein (575aa)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4R3_9FIRM
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU97099.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_007_000M1_scaffold_1869_18

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comp(22591..23142)
DNA (552bp) protein (184aa)
Membrane protein containing DUF1393 n=1 Tax=human gut metagenome RepID=K1V3N7_9ZZZZ
Membrane protein containing DUF1393 {ECO:0000313|EMBL:EKC78481.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted membrane protein
L1_007_000M1_scaffold_1869_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23872..24222)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50205.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_007_000M1_scaffold_1869_20

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comp(24261..24929)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1U5S7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC75399.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1869_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24926..26182)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76943.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1869_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26216..27193)
DNA (978bp) protein (326aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJJ4_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFB76942.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative hydrolase
L1_007_000M1_scaffold_1869_23

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comp(27229..28164)
DNA (936bp) protein (312aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T0S6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59665.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1869_24

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comp(28788..29033)
DNA (246bp) protein (82aa)
Acetyltransferase, GNAT family n=1 Tax=human gut metagenome RepID=K1UW73_9ZZZZ
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKC75891.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
N-acetyltransferase GCN5
L1_007_000M1_scaffold_1869_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29049..29912)
DNA (864bp) protein (288aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJJ0_9FIRM
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EFB76938.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcriptional regulator IclR-like protein
L1_007_000M1_scaffold_1869_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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30229..31191
DNA (963bp) protein (321aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EFB76937.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EFB76937.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EFB76937.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI9_9FIRM
L1_007_000M1_scaffold_1869_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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31264..32289
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI8_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EFB76936.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1869_28

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32579..33769
DNA (1191bp) protein (397aa)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region (Fragment) n=1 Tax=human gut metagenome RepID=K1RWW9_9ZZZZ
BirA, biotin-[acetyl-CoA-carboxylase] ligase region {ECO:0000313|EMBL:EKC52997.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
biotin
L1_007_000M1_scaffold_1869_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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33973..34518
DNA (546bp) protein (182aa)
BioY family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI6_9FIRM
BioY family protein {ECO:0000313|EMBL:EFB76934.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_1869_30

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34660..35130
DNA (471bp) protein (157aa)
Holliday junction resolvase n=1 Tax=human gut metagenome RepID=K1TK93_9ZZZZ
Holliday junction resolvase {ECO:0000313|EMBL:EKC59626.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
conserved hypothetical protein TIGR00250
Displaying items 1-30 of 38 in total

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