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L1_007_000M1_scaffold_1955

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1955_1
unknown

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128..502
DNA (375bp) protein (125aa)

This feature has no annotations

L1_007_000M1_scaffold_1955_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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651..2465
DNA (1815bp) protein (605aa)
Oligoendopeptidase F {ECO:0000313|EMBL:EFB76746.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFB76746.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Oligoendopeptidase F n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL88_9FIRM
pepF; oligoendopeptidase f
L1_007_000M1_scaffold_1955_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2934..3359
DNA (426bp) protein (142aa)
30S ribosomal protein S12 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL85_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S12P
L1_007_000M1_scaffold_1955_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3471..3941
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL84_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S7P
L1_007_000M1_scaffold_1955_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3967..6090
DNA (2124bp) protein (708aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL83_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1955_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6196..7401
DNA (1206bp) protein (402aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=root RepID=D1PL82_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1955_7
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

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8295..9008
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CDR6_CAPO3
Uncharacterized protein {ECO:0000313|EMBL:KJE95951.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
cell wall surface anchor family protein
L1_007_000M1_scaffold_1955_8

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9066..14537
DNA (5472bp) protein (1824aa)
1,4-beta-N-acetylmuramidase (EC:3.2.1.96)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S6I1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC56282.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_1955_9
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15334..16863
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37803.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_007_000M1_scaffold_1955_10
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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17224..19008
DNA (1785bp) protein (595aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PVA0_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EKY19380.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_1955_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19963..20127)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08319.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative site-specific recombinase
Displaying 11 items

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