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L1_007_000M1_scaffold_6376

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_6376_1

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2..178
-----------------
DNA (177bp)
protein (59aa)
Glycosyl transferase group 1 {ECO:0000313|EMBL:EKC47157.1}; EC=2.4.-.- {ECO:0000313|EMBL:EKC47157.1};; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glycosyl transferase family protein (EC:2.4.-.-)
Glycosyl transferase group 1 (Fragment) n=1 Tax=human gut metagenome RepID=K1REN7_9ZZZZ
L1_007_000M1_scaffold_6376_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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211..1101
-----------------
DNA (891bp)
protein (297aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q3A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC31183.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
phage DNA replication protein (predicted replicative helicase loader)
L1_007_000M1_scaffold_6376_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1117..1392
-----------------
DNA (276bp)
protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CH03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31537.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000M1_scaffold_6376_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1629..3293
-----------------
DNA (1665bp)
protein (555aa)
Recombinase n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PI90_9CLOT
Recombinase {ECO:0000313|EMBL:CDF24771.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
recombinase
L1_007_000M1_scaffold_6376_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3310..4635
-----------------
DNA (1326bp)
protein (442aa)
Recombinase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PUJ6_9FIRM
Recombinase {ECO:0000313|EMBL:CDC28053.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
recombinase
L1_007_000M1_scaffold_6376_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4846..5229
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KF67_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS44943.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_007_000M1_scaffold_6376_7

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5237..6139
-----------------
DNA (903bp)
protein (301aa)
Site-specific recombinase (Fragment) n=1 Tax=human gut metagenome RepID=K1U0Y2_9ZZZZ
Site-specific recombinase {ECO:0000313|EMBL:EKC78942.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_6376_8

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6099..6623
-----------------
DNA (525bp)
protein (175aa)
Site-specific recombinase (Fragment) n=1 Tax=human gut metagenome RepID=K1U0Y2_9ZZZZ
Site-specific recombinase {ECO:0000313|EMBL:EKC78942.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_6376_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6738..8408
-----------------
DNA (1671bp)
protein (557aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79701.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_007_000M1_scaffold_6376_10
Paenibacillus popilliae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8454..9389
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein n=2 Tax=Sporolactobacillus vineae RepID=UPI00037CBD22
Permease component {ECO:0000313|EMBL:GAC43083.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 14706.;"
hypothetical protein
L1_007_000M1_scaffold_6376_11
unknown

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9415..9996
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

L1_007_000M1_scaffold_6376_12

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comp(10102..10446)
-----------------
DNA (345bp)
protein (115aa)
Protein containing Helix-turn-helix type 3 domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RUF9_9ZZZZ
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:EKC46969.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_6376_13
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10972..11469
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EWM54165.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
KaiC.
Displaying 13 items

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