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L1_007_000M1_scaffold_2160

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2160_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(159..1703)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75346.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L1_007_000M1_scaffold_2160_2

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2217..2906
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TUH0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC71334.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
PAP2 superfamily.
L1_007_000M1_scaffold_2160_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3379..4581
DNA (1203bp) protein (401aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY42_ROSHA
flavodoxin/nitric oxide synthase
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:AEN97630.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_2160_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4704..6083)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76291.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L1_007_000M1_scaffold_2160_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6225..7523)
DNA (1299bp) protein (433aa)
GDSL-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM27_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EFB76292.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_2160_6
unknown

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comp(7699..8799)
DNA (1101bp) protein (367aa)

This feature has no annotations

L1_007_000M1_scaffold_2160_7
unknown

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comp(8796..9122)
DNA (327bp) protein (109aa)

This feature has no annotations

L1_007_000M1_scaffold_2160_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9969..11648)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69123.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Resolvase domain
L1_007_000M1_scaffold_2160_9
unknown

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comp(11840..12019)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000M1_scaffold_2160_10

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comp(12007..12507)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RQE8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC47578.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_2160_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12500..12907)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76836.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_2160_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12988..15108)
DNA (2121bp) protein (707aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69116.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Rad3-related DNA helicases
L1_007_000M1_scaffold_2160_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15346..15672)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AYC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81456.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_007_000M1_scaffold_2160_14
unknown

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comp(16041..16208)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_007_000M1_scaffold_2160_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16376..17605
DNA (1230bp) protein (410aa)
Site-specific recombinase, phage integrase family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW96_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG93130.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
integrase/recombinase
L1_007_000M1_scaffold_2160_16
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17605..18594
DNA (990bp) protein (330aa)
Putative integrase n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0JBR0_9FIRM
putative integrase/recombinase y4rB
Putative integrase/recombinase y4rB {ECO:0000313|EMBL:AHM57259.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L1_007_000M1_scaffold_2160_17
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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18584..19597
DNA (1014bp) protein (338aa)
phage-specific recombinase/integrase XerD id=3607571 bin=GWF2_Lentisphaerae_38_69 species=Lentibacillus jeotgali genus=Lentibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
integrase family protein
Tax=GWF2_Lentisphaerae_38_69_curated
L1_007_000M1_scaffold_2160_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19646..20302)
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=root RepID=R6QWG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40963.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Putative amidoligase enzyme.
L1_007_000M1_scaffold_2160_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20303..21250)
DNA (948bp) protein (316aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQE1_9CLOT
modification methylase SPRI
Displaying 19 items

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