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L1_007_000M1_scaffold_2170

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2170_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..540)
DNA (540bp) protein (180aa)
Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB74510.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_2170_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(698..1894)
DNA (1197bp) protein (399aa)
Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB74511.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
integrase protein
L1_007_000M1_scaffold_2170_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2050..3153)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75120.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_2170_4

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comp(4297..5493)
DNA (1197bp) protein (399aa)
YSIRK-targeted surface antigen transcriptional regulator n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW15_9FIRM
Dsg protein {ECO:0000313|EMBL:AKC35077.1}; TaxID=673271 species="Bacteria.;" source="intestinal bacterium CG19-1.;"
hypothetical protein
L1_007_000M1_scaffold_2170_5
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5854..7257
DNA (1404bp) protein (468aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium sp. ASF502 RepID=N2B7V2_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EMZ32859.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Na+/melibiose symporter and related transporters
L1_007_000M1_scaffold_2170_6
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7314..10064
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A435_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ22956.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L1_007_000M1_scaffold_2170_7
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

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10070..12331
DNA (2262bp) protein (754aa)
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 domain protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CB68_9FIRM
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:CCX65195.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
L1_007_000M1_scaffold_2170_8
unknown

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comp(12253..12447)
DNA (195bp) protein (65aa)

This feature has no annotations

L1_007_000M1_scaffold_2170_9

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comp(13551..15200)
DNA (1650bp) protein (550aa)
suc13P; sucrose phosphorylase (EC:2.4.1.7)
Sucrose phosphorylase (Fragment) n=1 Tax=human gut metagenome RepID=K1UC40_9ZZZZ
Sucrose phosphorylase {ECO:0000313|EMBL:EKC79748.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_2170_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15222..16190)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72405.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000M1_scaffold_2170_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16206..17726)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37163.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
beta-lactamase
L1_007_000M1_scaffold_2170_12

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comp(17707..18531)
DNA (825bp) protein (275aa)
Acetylesterase n=1 Tax=human gut metagenome RepID=K1TNJ2_9ZZZZ
Acetylesterase {ECO:0000313|EMBL:EKC71183.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
esterase
L1_007_000M1_scaffold_2170_13

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comp(18549..19361)
DNA (813bp) protein (271aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RW09_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC45735.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_2170_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19375..20277)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72414.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
sugar ABC transporter permease
L1_007_000M1_scaffold_2170_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20293..21237)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72413.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
sugar ABC transporter permease
L1_007_000M1_scaffold_2170_16
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(21323..22858)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036414CB
Extracellular solute-binding protein {ECO:0000313|EMBL:ETT41364.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
hypothetical protein
L1_007_000M1_scaffold_2170_17

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23306..24988
DNA (1683bp) protein (561aa)
Sensor with HAMP domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S9P7_9ZZZZ
Sensor with HAMP domain protein {ECO:0000313|EMBL:EKC54158.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative sensor with HAMP domain
L1_007_000M1_scaffold_2170_18

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24966..26549
DNA (1584bp) protein (528aa)
Two-component response regulator (Fragment) n=1 Tax=human gut metagenome RepID=K1RYL8_9ZZZZ
Two-component response regulator {ECO:0000313|EMBL:EKC46520.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_2170_19

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comp(26659..27117)
DNA (459bp) protein (153aa)
Protein-tyrosine-phosphatase, low molecular weight {ECO:0000313|EMBL:EKC70767.1}; EC=3.1.3.48 {ECO:0000313|EMBL:EKC70767.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase, low molecular weight n=2 Tax=human gut metagenome RepID=K1TC82_9ZZZZ
L1_007_000M1_scaffold_2170_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27677..28384
DNA (708bp) protein (236aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QC95_9FIRM
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDC30694.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Response regulator of the LytR/AlgR family
Displaying 20 items

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