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L1_007_000M1_scaffold_2345

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2345_1

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636..1820
DNA (1185bp) protein (395aa)
ATPase (AAA+ superfamily) n=1 Tax=human gut metagenome RepID=K1U5C1_9ZZZZ
ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EKC77478.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000M1_scaffold_2345_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2165..3370)
DNA (1206bp) protein (402aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFB77462.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFB77462.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIV3_9FIRM
L1_007_000M1_scaffold_2345_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4050..4895
DNA (846bp) protein (282aa)
4-deoxy-L-threo-5-hexulose uronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687, ECO:0000313|EMBL:CBK99661.1};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K062_9FIRM
L1_007_000M1_scaffold_2345_4
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4988..5356
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WHB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD03536.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L1_007_000M1_scaffold_2345_5

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5490..6299
DNA (810bp) protein (270aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Gluconate 5-dehydrogenase (Fragment) n=1 Tax=human gut metagenome RepID=K1U6Y3_9ZZZZ
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EKC67246.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_2345_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6781..8223)
DNA (1443bp) protein (481aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPU0_9FIRM
L1_007_000M1_scaffold_2345_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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8589..10088
DNA (1500bp) protein (500aa)
tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase {ECO:0000313|EMBL:CBL40260.1}; EC=1.1.1.58 {ECO:0000313|EMBL:CBL40260.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Tagaturonate reductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR35_9FIRM
L1_007_000M1_scaffold_2345_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10240..11724
DNA (1485bp) protein (495aa)
D-altronate dehydratase (EC:4.2.1.7)
SAF domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H487_9FIRM
SAF domain protein {ECO:0000313|EMBL:EEU97419.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000M1_scaffold_2345_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11972..12844
DNA (873bp) protein (291aa)
Aldose 1-epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPT8_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EFB75285.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Galactose mutarotase and related enzymes
L1_007_000M1_scaffold_2345_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13091..15748
DNA (2658bp) protein (886aa)
Glycosyl hydrolase family 25 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY7_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EFB76252.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_2345_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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15756..17366
DNA (1611bp) protein (537aa)
Metallo-beta-lactamase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFB76251.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L1_007_000M1_scaffold_2345_12

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17531..18820
DNA (1290bp) protein (430aa)
Membrane protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UM76_9ZZZZ
Membrane protein {ECO:0000313|EMBL:EKC79210.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_2345_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18918..19457
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76250.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_2345_14
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20042..21781)
DNA (1740bp) protein (580aa)
Carbon starvation protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C3B2_9CLOT
Carbon starvation protein {ECO:0000313|EMBL:CDA67669.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
Carbon starvation protein, predicted membrane protein
Displaying 14 items

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