ggKbase home page

L1_007_000M1_scaffold_558_13

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(11552..12181)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE (Fragment) n=1 Tax=human gut metagenome RepID=K1TNI1_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 4.00e-77
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EKC71168.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 146.0
  • Bit_score: 295
  • Evalue 5.60e-77
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 168.0
  • Bit_score: 142
  • Evalue 7.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 630
ATGTCGGGAGCATTTTTCGTATTAGTATACAGAAGCGCTTCCAACAAAGAAAGCGCGCCGGCAGATGAATGCGAAAGGAGGTGTGGGGCACTGAACCAAACAGATTTTACCCAGCTGATGCAGCAATACCAAAAACTCGTTTATACCGTTTGTTTGCAGTTTGTCCACAACCCCCACACCGCCGAGGATCTGACCCAGGATACCTTCCTTTCGGCATGGTCGTCCATTGACCGGTGCGAGCCCCAATACTATAAGCAATGGCTGGTGCGTGTGGCAGCCAACAAATGCAAGGACCACCTGAAAAGCTCCTGGGCGCGCAGGGTGGAGGCACAATCCGACGAAACGATGCCGGAACCACGCGGCACACCGCCGCCCGGCAGCGGCCTGCAAAGCGCAGAGCCGGACCCGCAGGATGAATTTATGCGCCAGACCGATGCCGCAGAGCTGGAAACGATGGTGCGCACCCTGCGCGAACCCTATGGCCGGGCCGCGGCCATGTATCTGCTGGACGGGCTGCCCGTGGCGGCCATAGCCCAAAAGCTGGGCCGCCCGGCACCCACTGTTCAGAACCAGCTGTTCCGCGCAAAAGCGATCCTGCGCAAACAGATCATGGAAAGGAGGCAGGAATAA
PROTEIN sequence
Length: 210
MSGAFFVLVYRSASNKESAPADECERRCGALNQTDFTQLMQQYQKLVYTVCLQFVHNPHTAEDLTQDTFLSAWSSIDRCEPQYYKQWLVRVAANKCKDHLKSSWARRVEAQSDETMPEPRGTPPPGSGLQSAEPDPQDEFMRQTDAAELETMVRTLREPYGRAAAMYLLDGLPVAAIAQKLGRPAPTVQNQLFRAKAILRKQIMERRQE*