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L1_007_000M1_scaffold_558_23

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(22013..22288)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMZ2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 91.0
  • Bit_score: 162
  • Evalue 1.00e-37
DNA-binding protein HU {ECO:0000313|EMBL:EFB75927.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 91.0
  • Bit_score: 162
  • Evalue 1.40e-37
Bacterial nucleoid DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 93.0
  • Bit_score: 115
  • Evalue 5.30e-24

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 276
ATGACCAGATCACAGTTGATTACCAAAGTTGCAAACGATACCGGCATTTCTGCCGTTGAAGTTGAAAAGATCATGGACGGCATTTTCGGCACCATCGGCGATGTGCTGAAGGCTGGTGATAAGGTTACCATTGCAGGCTTTGGCCGCTTTGAAATGCGCGAACGCCAGACCAAGAACTTCACCAACCCCAAGACCAAGGTTACCAGCCAGCTGGAACCCACCGCTATCCCCGGCTTTAAGGCAAGCGGCCGCCTGAAGGAAAAGGTTGGCAAGTAA
PROTEIN sequence
Length: 92
MTRSQLITKVANDTGISAVEVEKIMDGIFGTIGDVLKAGDKVTIAGFGRFEMRERQTKNFTNPKTKVTSQLEPTAIPGFKASGRLKEKVGK*