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L1_007_000M1_scaffold_1909_19

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(15999..16358)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN46_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 120.0
  • Bit_score: 145
  • Evalue 2.90e-32
Sigma-70 region 2 {ECO:0000313|EMBL:EFB75981.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 120.0
  • Bit_score: 145
  • Evalue 4.10e-32
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 121.0
  • Bit_score: 75
  • Evalue 1.00e-11

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGCTTTGGATGTATATGGCGATGCTGGAAACAGCGGAACAGAAAGATAAAATCGCCTATATTTATGAAAACTATGCAGGGATGATGTACCATGTAGCCATCGGTGTGGTGGGAGAACACTATTTGGCGGAGGACGCCGTACATGAAACCTTTTTGCGTCTGATACGGATAATAGATGAAGTGGAAATCGATGACGCAAAGAAGCTCAAACGTTTTCTTGTACTGTTAACACACAGCAAAGCGGTGGACGCCGTGCGCAAACTGAACAAGATGAAGCCAACGAGCGATGATGAGCTTGCGAATCATCCCACAACCGAGAATGGCCCCGAGGACGTTGCGCTGAACGCAATCGCTTTTTAG
PROTEIN sequence
Length: 120
MLWMYMAMLETAEQKDKIAYIYENYAGMMYHVAIGVVGEHYLAEDAVHETFLRLIRIIDEVEIDDAKKLKRFLVLLTHSKAVDAVRKLNKMKPTSDDELANHPTTENGPEDVALNAIAF*