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L1_007_000M1_scaffold_1909

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1909_1
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..277
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LDY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56999.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_007_000M1_scaffold_1909_2
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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312..1022
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47615.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L1_007_000M1_scaffold_1909_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1034..2188
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38444.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_007_000M1_scaffold_1909_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2189..3409
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LMN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56997.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L1_007_000M1_scaffold_1909_5
unknown

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comp(4314..4424)
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_000M1_scaffold_1909_6

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5118..6683
DNA (1566bp) protein (522aa)
Replication initiator protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TVC9_9ZZZZ
Replication initiator protein {ECO:0000313|EMBL:EKC73783.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Plasmid replication initiation protein
L1_007_000M1_scaffold_1909_7

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7028..7882
DNA (855bp) protein (285aa)
Cobyrinic acid ac-diamide synthase (Fragment) n=1 Tax=human gut metagenome RepID=K1T065_9ZZZZ
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EKC61049.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
chromosome segregation ATPase
L1_007_000M1_scaffold_1909_8
unknown

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7884..9146
DNA (1263bp) protein (421aa)

This feature has no annotations

L1_007_000M1_scaffold_1909_9
unknown

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9161..9631
DNA (471bp) protein (157aa)

This feature has no annotations

L1_007_000M1_scaffold_1909_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10199..10816
DNA (618bp) protein (206aa)
YqaJ viral recombinase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2S3_9CLOT
YqaJ viral recombinase family protein {ECO:0000313|EMBL:EEG54370.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
phage-type endonuclease
L1_007_000M1_scaffold_1909_11
unknown

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comp(10825..10983)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_007_000M1_scaffold_1909_12
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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comp(10970..11563)
DNA (594bp) protein (198aa)
Accessory gene regulator B id=2290423 bin=GWB2_Clostridiales_37_7 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Tax=GWB2_Clostridiales_37_7_curated
L1_007_000M1_scaffold_1909_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11670..13016)
DNA (1347bp) protein (449aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38676.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_007_000M1_scaffold_1909_14

Not on your lists

comp(13013..13726)
DNA (714bp) protein (238aa)
Response regulator of the LytR/AlgR family n=1 Tax=human gut metagenome RepID=K1UUE2_9ZZZZ
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EKC75246.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_1909_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13872..14414)
DNA (543bp) protein (181aa)
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN42_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EFB75977.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ECF family RNA polymerase sigma-24 subunit
L1_007_000M1_scaffold_1909_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14601..14987)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75979.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1909_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15242..15823)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75980.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1909_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15801..15983)
DNA (183bp) protein (61aa)
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN46_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EFB75981.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_1909_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15999..16358)
DNA (360bp) protein (120aa)
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN46_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EFB75981.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_000M1_scaffold_1909_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16375..16722)
DNA (348bp) protein (116aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I7M0_CLOCE
Uncharacterized protein {ECO:0000313|EMBL:KJF38162.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
XRE family transcriptional regulator
Displaying 20 items

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