ggKbase home page

L1_007_000M1_scaffold_2154_22

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 24512..25015

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily (Fragment) n=1 Tax=human gut metagenome RepID=K1SH91_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 96.0
  • Bit_score: 183
  • Evalue 1.80e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EKC54809.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 96.0
  • Bit_score: 183
  • Evalue 2.50e-43
sigma factor-like protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 81.0
  • Bit_score: 90
  • Evalue 4.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

human gut metagenome

Sequences

DNA sequence
Length: 504
ATGATATGGGACGTTTTAATAGACAGGAAGGGGGGTGAACCGTATCCAGACAGAATTATTGCTGCGGAAAGTGCAGAGCGGAGATACGGGTGCGCTGGACACTCTGATTACAGCGTACTATCCACAAATTCTGAACTATTGCCGTTGGCATACAGCGGACGAGCAGCAGGCGCAGGATGCAGCACAGGAAACCTTTTTGAAAGCGGTGCCATCGATCTGAACCGTACGATGAAGCGGACGGAGGTATCACTGGAGAGCTTGCCGGACGAACCCGCCTATCAGGAAAGCGGCTTTGCTGCGGCAGAGGAGAAAGCAAACCTGCGAGCGCTGACGGCCCAGTTGGAGCCGGAACAGCGGGAACTAGTATTGCTGCGGTTCGCACAACAGCTTAAATTGCGGGAGATCGCGCAGATTACAGGTCTGCCCCTGCGCACAGTGCAGTCCCGCCTGCGTGCCGCATTGAAAACCTTGAAAATGCAATTGGAAAAGGAGGACTGGAGATGA
PROTEIN sequence
Length: 168
MIWDVLIDRKGGEPYPDRIIAAESAERRYGCAGHSDYSVLSTNSELLPLAYSGRAAGAGCSTGNLFESGAIDLNRTMKRTEVSLESLPDEPAYQESGFAAAEEKANLRALTAQLEPEQRELVLLRFAQQLKLREIAQITGLPLRTVQSRLRAALKTLKMQLEKEDWR*