ggKbase home page

L1_007_000M1_scaffold_3960_13

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 10665..11588

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 307.0
  • Bit_score: 539
  • Evalue 1.90e-150
S-adenosyl-methyltransferase MraW (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 308.0
  • Bit_score: 479
  • Evalue 3.60e-133
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMP9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 307.0
  • Bit_score: 539
  • Evalue 1.40e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 924
GTGGAATTTAGTCATATCCCCGTTTTGCTCAGCCAATGCCTTGATGGGCTGGCCATTGACCCTGCCGGGATTTATCTGGACGGAACGGCCGGCGGGGCAGGCCACTCAAAGGAAATAGCAAAACGCCTGACCACCGGGCGGCTGATCTCGCTGGATCAGGACCCGGATGCGGTGGCAACCGCTGCCGCAAGGCTAAAGGGCTTACCCGCCCAGGTGGTTCAGGCCAACTTCCGCGAAACCGCCCGCGTGCTGGATGAACTGGAGATCCCCTTCATCAACGGCGCGCTGCTGGACCTTGGCGTTTCCAGCCACCAGCTGGACGATGCCGAGCGTGGCTTCTCCTATCACGCGGATGCCCCGCTGGATATGCGCATGAGCCAGCAGGGGCCCACCGCGGCAGACTTGGTGAACACCCTGGACCGTGAGGAACTGACCCGCATCCTGCGCGATTATGGTGAGGAACCGTATGCCTGGCAGATTGCGGGTAAAATCGTGAAAGCACGGGAGGAAGCCCCGATTTTGACGACCCTGCAGTTTGCGGACCTGATTGCATCCGCTATGCCGCCTGCCGAGCGCCGCAAGAACAAGAACCCCGCCCGCCGCAGCTTCCAGGCAGTGCGGATTGCCGTCAATGGGGAACTGGATGCCCTGAACGAGGGGATGGAGGCGATTTTCAGCCGCCTGGCCCCCGGCGGGCGGTTCTGCATCATCACGTTCCACAGCCTGGAGGACCGGCTGGTAAAACAGAAGTTCCGCCGCTGGGCCCAGCGCTGCACCTGCCCGCCGGAGCAGCCTATTTGCACCTGCGGCGGGATACCCAAAGCTAAACTGATTACCCGCAAGCCGATTGAAGCGGACGCTGGTGAGTTGGAAGAAAACCGCCGCAGCCGTTCCGCCAAGCTGCGCGTACTGGAAAAATTATAA
PROTEIN sequence
Length: 308
VEFSHIPVLLSQCLDGLAIDPAGIYLDGTAGGAGHSKEIAKRLTTGRLISLDQDPDAVATAAARLKGLPAQVVQANFRETARVLDELEIPFINGALLDLGVSSHQLDDAERGFSYHADAPLDMRMSQQGPTAADLVNTLDREELTRILRDYGEEPYAWQIAGKIVKAREEAPILTTLQFADLIASAMPPAERRKNKNPARRSFQAVRIAVNGELDALNEGMEAIFSRLAPGGRFCIITFHSLEDRLVKQKFRRWAQRCTCPPEQPICTCGGIPKAKLITRKPIEADAGELEENRRSRSAKLRVLEKL*