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L1_007_000M1_scaffold_3418

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3418_1
unknown

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3..152
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_000M1_scaffold_3418_2
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(145..513)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=2 Tax=Megasphaera RepID=S7J2K8_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
50S ribosomal protein L7/L12
L1_007_000M1_scaffold_3418_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(576..1133)
DNA (558bp) protein (186aa)
50S ribosomal protein L10 n=2 Tax=Megasphaera RepID=S7IXR0_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
50S ribosomal protein L10
L1_007_000M1_scaffold_3418_4
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1309..2025)
DNA (717bp) protein (239aa)
50S ribosomal protein L1 n=2 Tax=Megasphaera RepID=G0VM63_MEGEL
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000313|EMBL:CCC72625.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_3418_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2082..2507)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=4 Tax=Megasphaera RepID=G0VM64_MEGEL
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_3418_6
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2597..3136)
DNA (540bp) protein (180aa)
Transcription termination/antitermination protein NusG n=2 Tax=Megasphaera RepID=G0VM65_MEGEL
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_3418_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3152..3385)
DNA (234bp) protein (78aa)
Protein translocase subunit SecE n=2 Tax=Megasphaera RepID=S7J2L2_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
preprotein translocase
L1_007_000M1_scaffold_3418_8
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3433..3582)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=5 Tax=Megasphaera RepID=G0VM67_MEGEL
hypothetical protein
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
L1_007_000M1_scaffold_3418_9
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3794..4150)
DNA (357bp) protein (119aa)
Nucleotidyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MZ00_9FIRM
Nucleotidyltransferase {ECO:0000313|EMBL:CDF05795.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
nucleotidyltransferase
L1_007_000M1_scaffold_3418_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4362..4547)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HL64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP16429.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_3418_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4778..5050)
DNA (273bp) protein (91aa)
Copper chaperone CopZ family protein n=2 Tax=Megasphaera RepID=S7IXR7_9FIRM
Copper chaperone CopZ family protein {ECO:0000313|EMBL:EPP16431.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
copper chaperone CopZ family protein
L1_007_000M1_scaffold_3418_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5272..6648
DNA (1377bp) protein (459aa)
Amino acid permease n=2 Tax=Megasphaera RepID=S7HPI6_9FIRM
Amino acid permease {ECO:0000313|EMBL:EPP14401.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
amino acid permease
L1_007_000M1_scaffold_3418_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6864..7508)
DNA (645bp) protein (215aa)
FMN reductase, NADPH-dependent n=1 Tax=Clostridium sp. D5 RepID=F0Z5G8_9CLOT
FMN reductase, NADPH-dependent {ECO:0000313|EMBL:EGB90651.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Multimeric flavodoxin WrbA
L1_007_000M1_scaffold_3418_14
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7687..8013
DNA (327bp) protein (109aa)
Transcriptional regulator n=2 Tax=Clostridium botulinum RepID=C3L2F7_CLOB6
Regulatory protein {ECO:0000313|EMBL:KGK86757.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
transcriptional regulator
L1_007_000M1_scaffold_3418_15
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8004..9299)
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Enolase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0U2_9FIRM
enolase
L1_007_000M1_scaffold_3418_16
unknown

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9467..9724
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 16 items

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