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L1_007_000M1_scaffold_1164

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1164_1
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(148..2514)
DNA (2367bp) protein (789aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Endonuclease MutS2 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMK5_MEGEL
recombination and DNA strand exchange inhibitor protein
L1_007_000M1_scaffold_1164_2
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2532..4721)
DNA (2190bp) protein (730aa)
Peptidase n=2 Tax=Megasphaera RepID=S7HJ70_9FIRM
Peptidase {ECO:0000313|EMBL:EPP15742.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
peptidase
L1_007_000M1_scaffold_1164_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4757..5842)
DNA (1086bp) protein (362aa)
Iron-containing alcohol dehydrogenase n=2 Tax=Megasphaera RepID=S7HJ84_9FIRM
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EPP15743.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
iron-containing alcohol dehydrogenase
L1_007_000M1_scaffold_1164_4
unknown

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comp(5908..6027)
DNA (120bp) protein (40aa)

This feature has no annotations

L1_007_000M1_scaffold_1164_5
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6083..6475)
DNA (393bp) protein (131aa)
Ribosomal protein S9 n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UJV8_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
30S ribosomal protein S9
L1_007_000M1_scaffold_1164_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6498..6938)
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=2 Tax=Megasphaera RepID=S7HJ73_9FIRM
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_1164_7
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7618..8904
DNA (1287bp) protein (429aa)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VML4_MEGEL
O-acetylhomoserine aminocarboxypropyltransferase
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:CCC74406.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1164_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8933..9868
DNA (936bp) protein (312aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Homoserine O-succinyltransferase n=2 Tax=Megasphaera RepID=S7IZ52_9FIRM
homoserine O-succinyltransferase
L1_007_000M1_scaffold_1164_9
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9935..10558)
DNA (624bp) protein (208aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Uracil phosphoribosyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VML6_MEGEL
uracil phosphoribosyltransferase
L1_007_000M1_scaffold_1164_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10576..11016)
DNA (441bp) protein (147aa)
Ribose-5-phosphate isomerase B n=3 Tax=Megasphaera RepID=G0VML7_MEGEL
ribose-5-phosphate isomerase B
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EPP18212.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_1164_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11088..12140)
DNA (1053bp) protein (351aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VML8_MEGEL
sua5/YciO/YrdC/YwlC family protein
L1_007_000M1_scaffold_1164_12
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12147..13004)
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Release factor glutamine methyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MV07_9FIRM
protein-(Glutamine-N5) methyltransferase
L1_007_000M1_scaffold_1164_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12997..14085)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=2 Tax=Megasphaera RepID=S7IZ50_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
peptide chain release factor 1
L1_007_000M1_scaffold_1164_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14096..14983)
DNA (888bp) protein (296aa)
Membrane family protein n=2 Tax=Megasphaera RepID=S7J2R5_9FIRM
Membrane family protein {ECO:0000313|EMBL:EPP18216.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
membrane family protein
L1_007_000M1_scaffold_1164_15
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15056..15268)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MX01_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
50S ribosomal protein L31
L1_007_000M1_scaffold_1164_16
unknown

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comp(15475..15888)
DNA (414bp) protein (138aa)

This feature has no annotations

L1_007_000M1_scaffold_1164_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15951..16676)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HIA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP15980.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_1164_18
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16800..18083)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. NM10 RepID=S7IWM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP15981.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_1164_19
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18194..19615)
DNA (1422bp) protein (474aa)
Putative glycolate oxidase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMP6_MEGEL
glycolate oxidase
Putative glycolate oxidase {ECO:0000313|EMBL:CCC74438.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1164_20
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20075..21673)
DNA (1599bp) protein (533aa)
Transporter n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYE1_9FIRM
Transporter {ECO:0000313|EMBL:CDF04828.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
transporter
L1_007_000M1_scaffold_1164_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22042..22842)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Pyrroline-5-carboxylate reductase n=2 Tax=Megasphaera RepID=S7HK32_9FIRM
pyrroline-5-carboxylate reductase
L1_007_000M1_scaffold_1164_22
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22866..24266)
DNA (1401bp) protein (467aa)
Aminotransferase n=2 Tax=Megasphaera RepID=S7HIN7_9FIRM
Aminotransferase {ECO:0000313|EMBL:EPP15985.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
aminotransferase
Displaying 22 items

View Taxonomy