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L1_007_000M1_scaffold_1404

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1404_1
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(123..590)
-----------------
DNA (468bp)
protein (156aa)
Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RJK6_ACIFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB47258.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L1_007_000M1_scaffold_1404_2
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(719..1405)
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HKR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP16193.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_1404_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1713..2585
-----------------
DNA (873bp)
protein (291aa)
2-hydroxy-3-oxopropionate reductase n=2 Tax=Megasphaera RepID=S7HEX2_9FIRM
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EPP16192.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
2-hydroxy-3-oxopropionate reductase
L1_007_000M1_scaffold_1404_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2630..3064
-----------------
DNA (435bp)
protein (145aa)
Transcriptional regulator MerR family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAL9_9FIRM
Putative transcription regulator {ECO:0000313|EMBL:CDF47247.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative transcriptional regulator
L1_007_000M1_scaffold_1404_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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3113..3556
-----------------
DNA (444bp)
protein (148aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HIE9_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY27904.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_007_000M1_scaffold_1404_6
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3751..4551)
-----------------
DNA (801bp)
protein (267aa)
Precorrin-4 C(11)-methyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MWB3_9FIRM
Precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:CDF04108.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
precorrin-4 C11-methyltransferase
L1_007_000M1_scaffold_1404_7
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4548..5684)
-----------------
DNA (1137bp)
protein (379aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQT5_MEGEL
cobalt-precorrin-6A synthase [deacetylating]
L1_007_000M1_scaffold_1404_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5697..6491)
-----------------
DNA (795bp)
protein (265aa)
Iron(III) dicitrate transport ATP-binding protein FecE n=2 Tax=Megasphaera RepID=S7J510_9FIRM
Iron(III) dicitrate transport ATP-binding protein FecE {ECO:0000313|EMBL:EPP18810.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
iron(III) dicitrate transport ATP-binding protein FecE
L1_007_000M1_scaffold_1404_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6495..7496)
-----------------
DNA (1002bp)
protein (334aa)
Iron(3+)-hydroxamate import system permease protein FhuB n=2 Tax=Megasphaera RepID=S7HND5_9FIRM
Iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EPP18811.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
iron(3+)-hydroxamate import system permease protein FhuB
L1_007_000M1_scaffold_1404_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7489..8442)
-----------------
DNA (954bp)
protein (318aa)
Periplasmic binding protein n=2 Tax=Megasphaera RepID=S7HNP0_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EPP18812.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
periplasmic binding protein
L1_007_000M1_scaffold_1404_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8458..10866)
-----------------
DNA (2409bp)
protein (803aa)
TonB-dependent receptor n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQT1_MEGEL
tonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CCC73781.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1404_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10863..11276)
-----------------
DNA (414bp)
protein (138aa)
TolR protein n=2 Tax=Megasphaera RepID=S7HSV6_9FIRM
TolR protein {ECO:0000313|EMBL:EPP18814.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
TolR protein
L1_007_000M1_scaffold_1404_13
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11278..11841)
-----------------
DNA (564bp)
protein (188aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQS9_MEGEL
motA/TolQ/ExbB proton channel family protein
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CCC73779.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1404_14
Selenomonas infelix, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13379..13600)
-----------------
DNA (222bp)
protein (74aa)
Putative uncharacterized protein n=1 Tax=Selenomonas infelix ATCC 43532 RepID=G5GML6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHG21794.1}; TaxID=679201 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas infelix ATCC 43532.;"
L1_007_000M1_scaffold_1404_15
Acidaminococcus sp. CAG:542, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15491..15781
-----------------
DNA (291bp)
protein (97aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Megasphaera sp. UPII 199-6 RepID=F5TFZ2_9FIRM
Addiction module antitoxin RelB/DinJ family {ECO:0000313|EMBL:CDE94298.1}; TaxID=1262687 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:542.;"
DNA-damage-inducibile protein
L1_007_000M1_scaffold_1404_16
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15778..15990
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DIW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF47548.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis DNF00314.;"
L1_007_000M1_scaffold_1404_17
unknown

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comp(16007..16366)
-----------------
DNA (360bp)
protein (120aa)

This feature has no annotations

L1_007_000M1_scaffold_1404_18
unknown

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comp(16915..17919)
-----------------
DNA (1005bp)
protein (335aa)

This feature has no annotations

L1_007_000M1_scaffold_1404_19
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(17933..18727)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LC97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY05601.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L1_007_000M1_scaffold_1404_20
unknown

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comp(18761..19297)
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

L1_007_000M1_scaffold_1404_21
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19746..20459)
-----------------
DNA (714bp)
protein (238aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
L1_007_000M1_scaffold_1404_22
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20461..21576)
-----------------
DNA (1116bp)
protein (372aa)
Putative uncharacterized protein n=1 Tax=Brenneria sp. EniD312 RepID=G7LTQ3_9ENTR
ATPase-like protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
Displaying 22 items

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