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L1_007_000M1_scaffold_1481

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1481_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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339..1520
DNA (1182bp) protein (394aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EEA81016.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEA81016.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSJ6_9CLOT
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L1_007_000M1_scaffold_1481_2
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1595..2248)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI0003772D53
Flavodoxin {ECO:0000313|EMBL:KHM51680.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
NADPH-dependent FMN reductase
L1_007_000M1_scaffold_1481_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2393..3106
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI97626.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Flavodoxins
L1_007_000M1_scaffold_1481_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3212..4588
DNA (1377bp) protein (459aa)
MATE efflux family protein n=2 Tax=Megasphaera RepID=S7HJ67_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EPP15904.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
MATE efflux family protein
L1_007_000M1_scaffold_1481_5
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4666..5085
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MV50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF04221.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_000M1_scaffold_1481_6
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5194..5694
DNA (501bp) protein (167aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Megasphaera RepID=G0VPT7_MEGEL
crossover junction endodeoxyribonuclease ruvC
L1_007_000M1_scaffold_1481_7
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5691..6296
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Megasphaera RepID=G0VPT8_MEGEL
holliday junction ATP-dependent DNA helicase ruvA
L1_007_000M1_scaffold_1481_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6300..7304
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPT9_MEGEL
holliday junction ATP-dependent DNA helicase ruvB
L1_007_000M1_scaffold_1481_9
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7301..7531
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MUK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF04041.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_000M1_scaffold_1481_10
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7543..8892
DNA (1350bp) protein (450aa)
SpoIID/LytB domain protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPU1_MEGEL
SpoIID/LytB domain protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:CCC73469.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1481_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8918..9937
DNA (1020bp) protein (340aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Megasphaera RepID=S7HKS1_9FIRM
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L1_007_000M1_scaffold_1481_12
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9948..11054
DNA (1107bp) protein (369aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPU3_MEGEL
queuine tRNA-ribosyltransferase
L1_007_000M1_scaffold_1481_13
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11089..11490
DNA (402bp) protein (134aa)
Preprotein translocase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPU4_MEGEL
preprotein translocase
Preprotein translocase {ECO:0000313|EMBL:CCC73472.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1481_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11432..12046
DNA (615bp) protein (205aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CCC73473.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPU5_MEGEL
5-formyltetrahydrofolate cyclo-ligase
L1_007_000M1_scaffold_1481_15
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12094..13329
DNA (1236bp) protein (412aa)
Protein translocase subunit SecD n=2 Tax=Megasphaera RepID=G0VPU6_MEGEL
protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1481_16
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13326..14276
DNA (951bp) protein (317aa)
Protein-export membrane protein SecF n=2 Tax=Megasphaera RepID=G0VPU7_MEGEL
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_000M1_scaffold_1481_17
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14380..14961
DNA (582bp) protein (194aa)
Selenium metabolism protein YedF n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N1D6_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:CDF05907.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
selenium metabolism protein YedF
L1_007_000M1_scaffold_1481_18
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14965..15876
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPU9_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73477.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1481_19
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15814..16737)
DNA (924bp) protein (308aa)
Transcriptional regulator n=2 Tax=Megasphaera RepID=S7HKT8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EPP16282.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
transcriptional regulator
L1_007_000M1_scaffold_1481_20
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16917..18170
DNA (1254bp) protein (418aa)
Diaminopimelate decarboxylase n=2 Tax=Megasphaera RepID=G0VPV1_MEGEL
diaminopimelate decarboxylase
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCC73479.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1481_21
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18322..18834
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BL7 RepID=S7HMD9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73480.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_1481_22
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18847..19362
DNA (516bp) protein (172aa)
Helix-turn-helix type 11 domain protein n=2 Tax=Megasphaera RepID=S7HMT0_9FIRM
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:EPP16285.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
helix-turn-helix type 11 domain protein
L1_007_000M1_scaffold_1481_23
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19442..20779
DNA (1338bp) protein (446aa)
Major facilitator family transporter n=2 Tax=Megasphaera RepID=G0VPV4_MEGEL
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:CCC73482.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying 23 items

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