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L1_007_000M1_scaffold_848

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_848_1
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..9206)
DNA (9204bp) protein (3068aa)
Putative S-layer y domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BMS3_9FIRM
Putative S-layer y domain protein {ECO:0000313|EMBL:CCX56875.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L1_007_000M1_scaffold_848_2
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10232..10774)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPP2_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73420.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_848_3
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10906..12111)
DNA (1206bp) protein (402aa)
Transporter n=2 Tax=Megasphaera RepID=G0VPP1_MEGEL
transporter
Transporter {ECO:0000313|EMBL:CCC73419.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_848_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12232..13125)
DNA (894bp) protein (298aa)
Transcriptional regulator n=2 Tax=Megasphaera RepID=S7HMT3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EPP18141.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
transcriptional regulator
L1_007_000M1_scaffold_848_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13259..13543)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HN46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18142.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_848_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13555..13971)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Putative Holliday junction resolvase n=2 Tax=Megasphaera RepID=S7HMV1_9FIRM
Holliday junction resolvase
L1_007_000M1_scaffold_848_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13979..14239)
DNA (261bp) protein (87aa)
UPF0297 protein NM10_05111 n=2 Tax=Megasphaera RepID=S7HR04_9FIRM
UPF0297 protein NM10_05111 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_848_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(14285..16891)
DNA (2607bp) protein (869aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Alanine--tRNA ligase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPN6_MEGEL
alanyl-tRNA synthetase
L1_007_000M1_scaffold_848_9
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17040..17798)
DNA (759bp) protein (253aa)
NlpC/P60 family protein n=2 Tax=Megasphaera RepID=G0VPN5_MEGEL
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:CCC73413.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_848_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17842..18804)
DNA (963bp) protein (321aa)
Glycosyltransferase n=2 Tax=Megasphaera RepID=S7HMS8_9FIRM
Glycosyltransferase {ECO:0000313|EMBL:EPP18146.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
glycosyltransferase
L1_007_000M1_scaffold_848_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18830..19177)
DNA (348bp) protein (116aa)
Thioredoxin n=2 Tax=Megasphaera RepID=S7HN41_9FIRM
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_848_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19296..19937)
DNA (642bp) protein (214aa)
Probable GTP-binding protein EngB n=2 Tax=Megasphaera RepID=S7HMU4_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ribosome biogenesis GTP-binding protein YsxC
L1_007_000M1_scaffold_848_13
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19937..22270)
DNA (2334bp) protein (778aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Lon protease n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MXJ0_9FIRM
endopeptidase La
L1_007_000M1_scaffold_848_14
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22343..23581)
DNA (1239bp) protein (413aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Megasphaera RepID=G0VPN0_MEGEL
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_000M1_scaffold_848_15
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23598..24203)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Megasphaera RepID=G0VPM9_MEGEL
ATP-dependent Clp protease proteolytic subunit
L1_007_000M1_scaffold_848_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24236..25582)
DNA (1347bp) protein (449aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Trigger factor n=2 Tax=Megasphaera RepID=S7HN39_9FIRM
trigger factor
L1_007_000M1_scaffold_848_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(25783..28209)
DNA (2427bp) protein (809aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Megasphaera RepID=S7HMT7_9FIRM
phenylalanyl-tRNA synthetase
L1_007_000M1_scaffold_848_18
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(28229..29254)
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Megasphaera RepID=S7HR14_9FIRM
phenylalanyl-tRNA synthetase alpha chain
L1_007_000M1_scaffold_848_19
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29532..30671)
DNA (1140bp) protein (380aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPM5_MEGEL
acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCC73403.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_848_20
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30713..31156)
DNA (444bp) protein (148aa)
Uncharacterized domain 1 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPM4_MEGEL
uncharacterized domain 1
Uncharacterized domain 1 {ECO:0000313|EMBL:CCC73402.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_848_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31149..31583)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HN35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18157.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
Displaying 21 items

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