ggKbase home page

L1_007_000M1_scaffold_963

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_963_1
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3..635
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMU8_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC72776.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_2
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

648..2081
DNA (1434bp) protein (478aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=2 Tax=Megasphaera RepID=G0VMU9_MEGEL
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CCC72777.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2094..2513
DNA (420bp) protein (140aa)
HIT domain-containing protein n=1 Tax=Megasphaera sp. BL7 RepID=S7HHF2_9FIRM
HIT domain-containing protein {ECO:0000313|EMBL:EPP18422.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
HIT domain-containing protein
L1_007_000M1_scaffold_963_4
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2575..3534
DNA (960bp) protein (320aa)
2-dehydro-3-deoxygluconokinase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N070_9FIRM
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:CDF05991.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
2-dehydro-3-deoxygluconokinase
L1_007_000M1_scaffold_963_5
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3583..4221
DNA (639bp) protein (213aa)
Possible 4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMV2_MEGEL
possible 4-hydroxy-2-oxoglutarate aldolase
Possible 4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CCC72780.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_6
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4400..4621
DNA (222bp) protein (74aa)
Putative 4-hydroxy-2-oxoglutarate aldolase (Fragment) n=1 Tax=Megasphaera sp. BL7 RepID=S7IYK4_9FIRM
possible 4-hydroxy-2-oxoglutarate aldolase
Putative 4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EPP14392.1}; Flags: Fragment;; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_963_7
unknown

Not on your lists

comp(4991..5203)
DNA (213bp) protein (71aa)

This feature has no annotations

L1_007_000M1_scaffold_963_8
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5894..6238
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=R7MZG4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF05203.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_000M1_scaffold_963_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6241..6681
DNA (441bp) protein (147aa)
Rrf2 family protein n=2 Tax=Megasphaera RepID=S7HL52_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:EPP14355.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
rrf2 family protein
L1_007_000M1_scaffold_963_10
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6702..7274
DNA (573bp) protein (191aa)
PAP2 family protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MXA4_9FIRM
PAP2 family protein {ECO:0000313|EMBL:CDF05205.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
PAP2 family protein
L1_007_000M1_scaffold_963_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7271..9079
DNA (1809bp) protein (603aa)
Alpha/beta hydrolase n=2 Tax=Megasphaera RepID=S7HF71_9FIRM
Alpha/beta hydrolase {ECO:0000313|EMBL:EPP14353.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
alpha/beta hydrolase
L1_007_000M1_scaffold_963_12
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9139..10437)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BL7 RepID=S7IXI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF05206.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_000M1_scaffold_963_13
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10615..12705)
DNA (2091bp) protein (697aa)
Oligopeptide transporter n=2 Tax=Megasphaera RepID=G0VMV7_MEGEL
Oligopeptide transporter {ECO:0000313|EMBL:CDF05207.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
oligopeptide transporter
L1_007_000M1_scaffold_963_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12954..14408
DNA (1455bp) protein (485aa)
Xaa-His dipeptidase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMV8_MEGEL
Xaa-His dipeptidase
Xaa-His dipeptidase {ECO:0000313|EMBL:CCC72786.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_15
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14475..15323)
DNA (849bp) protein (283aa)
Transcriptional regulator GntR family n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WC12_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ93331.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L1_007_000M1_scaffold_963_16
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16015..16389
DNA (375bp) protein (125aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W969_ATOPD
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:ACV50657.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L1_007_000M1_scaffold_963_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16593..16826
DNA (234bp) protein (78aa)
(4Fe-4S)-binding protein n=2 Tax=Megasphaera RepID=S7HL56_9FIRM
(4Fe-4S)-binding protein {ECO:0000313|EMBL:EPP14630.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
(4Fe-4S)-binding protein
L1_007_000M1_scaffold_963_18
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16834..17454)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HFY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14632.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_963_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17466..18041)
DNA (576bp) protein (192aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Xanthine phosphoribosyltransferase n=2 Tax=Megasphaera RepID=G0VMW2_MEGEL
Xanthine phosphoribosyltransferase
L1_007_000M1_scaffold_963_20
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18216..21959
DNA (3744bp) protein (1248aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMW3_MEGEL
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCC72791.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
phosphoribosylformylglycinamidine synthase
L1_007_000M1_scaffold_963_21
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


22119..22403
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=4 Tax=Megasphaera RepID=G0VMW4_MEGEL
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_963_22
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22420..22863
DNA (444bp) protein (148aa)
Single-stranded DNA-binding protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMW5_MEGEL
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_23
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


22909..23139
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=4 Tax=Megasphaera RepID=G0VMW6_MEGEL
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_000M1_scaffold_963_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23180..24430)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HFZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14637.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_963_25
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24452..25342)
DNA (891bp) protein (297aa)
Lipid kinase n=2 Tax=Megasphaera RepID=G0VMW8_MEGEL
lipid kinase
Lipid kinase {ECO:0000313|EMBL:CCC72796.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_26
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25517..27127
DNA (1611bp) protein (537aa)
Gamma-glutamyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MU82_9FIRM
Gamma-glutamyltransferase {ECO:0000313|EMBL:CDF04135.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
gamma-glutamyltransferase
L1_007_000M1_scaffold_963_27
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27197..28210
DNA (1014bp) protein (338aa)
D-cysteine desulfhydrase {ECO:0000313|EMBL:EPP14640.1}; EC=4.4.1.15 {ECO:0000313|EMBL:EPP14640.1};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
D-cysteine desulfhydrase n=2 Tax=Megasphaera RepID=S7HL66_9FIRM
1-aminocyclopropane-1-carboxylate deaminase
L1_007_000M1_scaffold_963_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28225..29220)
DNA (996bp) protein (332aa)
Phosphate/sulphate permeases n=2 Tax=Megasphaera RepID=G0VMX1_MEGEL
phosphate/sulphate permeases
Phosphate/sulphate permeases {ECO:0000313|EMBL:CCC72799.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_963_29
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29213..29842)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HFZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14642.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
phosphate transport regulator
L1_007_000M1_scaffold_963_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30070..31398
DNA (1329bp) protein (443aa)
Xanthine permease n=1 Tax=Megasphaera sp. BL7 RepID=S7IXJ0_9FIRM
Xanthine permease
Xanthine permease {ECO:0000313|EMBL:CCC72801.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying items 1-30 of 31 in total

View Taxonomy