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L1_007_000M1_scaffold_2007

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2007_1
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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215..2005
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N6F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78653.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L1_007_000M1_scaffold_2007_2
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2019..2615
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z5Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65397.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L1_007_000M1_scaffold_2007_3
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2735..3859)
DNA (1125bp) protein (375aa)
Putative NADPH-dependent butanol dehydrogenase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYT8_9FIRM
Putative NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:CDF05516.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Alcohol dehydrogenase, class IV
L1_007_000M1_scaffold_2007_4
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3875..5308)
DNA (1434bp) protein (478aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N077_9FIRM
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:CDF05517.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
NAD-dependent aldehyde dehydrogenases
L1_007_000M1_scaffold_2007_5
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5324..6133)
DNA (810bp) protein (270aa)
Ethanolamine utilization protein EutJ family protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0A5_9FIRM
Ethanolamine utilization protein EutJ family protein {ECO:0000313|EMBL:CDF05518.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
ethanolamine utilization protein EutJ family protein
L1_007_000M1_scaffold_2007_6
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6144..6782)
DNA (639bp) protein (213aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Phosphate propanoyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MWF0_9FIRM
propanediol utilization protein
L1_007_000M1_scaffold_2007_7
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6803..7105)
DNA (303bp) protein (101aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MY36_9FIRM
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDF05520.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_000M1_scaffold_2007_8
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7119..7379)
DNA (261bp) protein (87aa)
Putative carbon dioxide concentrating mechanism protein CcmL n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYU4_9FIRM
Putative carbon dioxide concentrating mechanism protein CcmL {ECO:0000313|EMBL:CDF05521.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_000M1_scaffold_2007_9
Enterococcus raffinosus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7431..7934)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Enterococcus raffinosus ATCC 49464 RepID=R2NU27_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH74508.1}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 49464.;"
hypothetical protein
L1_007_000M1_scaffold_2007_10
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7955..8689)
DNA (735bp) protein (245aa)
Conserved domain protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N081_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDF05522.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_000M1_scaffold_2007_11
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8705..8983)
DNA (279bp) protein (93aa)
Major carboxysome shell protein 1A n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0A8_9FIRM
Major carboxysome shell protein 1A {ECO:0000313|EMBL:CDF05523.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_000M1_scaffold_2007_12
Megasphaera sp. UPII 135-E, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9012..9830)
DNA (819bp) protein (273aa)
Propanediol utilization protein PduB n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MR46_9FIRM
Propanediol utilization protein PduB {ECO:0000313|EMBL:EGS31971.1}; TaxID=1000569 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. UPII 135-E.;"
microcompartments protein
L1_007_000M1_scaffold_2007_13
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9842..10783)
DNA (942bp) protein (314aa)
glycerol dehydratase, cobalamin-independent, small subunit (EC:1.97.1.4 4.2.1.30)
Putative pyruvate formate-lyase-activating enzyme n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYG2_9FIRM
Putative pyruvate formate-lyase-activating enzyme {ECO:0000313|EMBL:CDF04897.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_000M1_scaffold_2007_14
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10813..13401)
DNA (2589bp) protein (863aa)
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Formate C-acetyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MX37_9FIRM
Formate C-acetyltransferase {ECO:0000313|EMBL:CDF04896.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_000M1_scaffold_2007_15
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13648..14820)
DNA (1173bp) protein (391aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
S-adenosylmethionine synthase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MWF8_9FIRM
methionine adenosyltransferase
L1_007_000M1_scaffold_2007_16
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14845..15744)
DNA (900bp) protein (300aa)
Transcriptional regulator AraC family n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MUP6_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDF04894.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
transcriptional regulator
Displaying 16 items

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