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L1_007_000M1_scaffold_2066

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2066_1
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(287..1111)
DNA (825bp) protein (275aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ79_MEGEL
formamidopyrimidine-DNA glycosylase
L1_007_000M1_scaffold_2066_2
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1120..3699)
DNA (2580bp) protein (860aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
DNA polymerase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ78_MEGEL
DNA polymerase I
L1_007_000M1_scaffold_2066_3
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3731..4060)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ77_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73605.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_2066_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4079..4528)
DNA (450bp) protein (150aa)
SsrA-binding protein n=4 Tax=Megasphaera RepID=G0VQ76_MEGEL
ssrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_2066_5
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4565..6865)
DNA (2301bp) protein (767aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CCC73603.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Ribonuclease R n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ75_MEGEL
ribonuclease R
L1_007_000M1_scaffold_2066_6
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6980..7231)
DNA (252bp) protein (84aa)
Preprotein translocase n=4 Tax=Megasphaera RepID=G0VQ74_MEGEL
preprotein translocase
Preprotein translocase {ECO:0000313|EMBL:CCC73602.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_2066_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7261..7971)
DNA (711bp) protein (237aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EPP18578.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EPP18578.1};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
RNA polymerase factor sigma-70 n=1 Tax=Megasphaera sp. NM10 RepID=S7HSF3_9FIRM
RNA polymerase
L1_007_000M1_scaffold_2066_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7986..8738)
DNA (753bp) protein (251aa)
RNA methyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ72_MEGEL
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:CCC73600.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_2066_9
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8735..9220)
DNA (486bp) protein (162aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Mini-ribonuclease 3 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ71_MEGEL
RNAse3 domain protein
L1_007_000M1_scaffold_2066_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9217..10662)
DNA (1446bp) protein (482aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Cysteine--tRNA ligase n=2 Tax=Megasphaera RepID=S7HK06_9FIRM
cysteinyl-tRNA synthetase
L1_007_000M1_scaffold_2066_11
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11013..12470)
DNA (1458bp) protein (486aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Glutamate--tRNA ligase n=1 Tax=Megasphaera sp. BL7 RepID=S7HK00_9FIRM
glutamyl-tRNA synthetase
L1_007_000M1_scaffold_2066_12
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12495..13664)
DNA (1170bp) protein (390aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ68_MEGEL
2C-methyl-D-erythritol 2
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_2066_13
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13674..14849)
DNA (1176bp) protein (392aa)
PIN domain protein n=2 Tax=Megasphaera RepID=G0VQ67_MEGEL
PIN domain protein
PIN domain protein {ECO:0000313|EMBL:CCC73595.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_2066_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15057..15638)
DNA (582bp) protein (194aa)
Putative septum site-determining protein MinC n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQ66_MEGEL
septum site-determining protein MinC
Putative septum site-determining protein MinC {ECO:0000313|EMBL:CCC73594.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying 14 items

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