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L1_007_000M1_scaffold_406_15

Organism: dasL1_007_000M1_concoct_55_fa

near complete RP 47 / 55 BSCG 50 / 51 ASCG 14 / 38
Location: 13555..16839

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 1094.0
  • Bit_score: 1912
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Megasphaera RepID=S7HGD4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 1094.0
  • Bit_score: 1912
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 1094.0
  • Bit_score: 1910
  • Evalue 0.0

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Taxonomy

Megasphaera sp. NM10 → Megasphaera → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3285
ATGAAGCAATTCTTTCAATGGATGAATCAAGATGAAAATATCCGGTCCGCCGGGGAGGCCTTTTTAAAGCCCGGCTGTCATAGCATCTACGGCCTCAGCGGCTCTGTCAAGAGCGCTCTGGTCGCTAAAGTGCTGCACGAAGGCCCCCGTCAGGTCGTCCTCGTCGTCCCGTCGCGGGAACAGGCTGCGGCCTGGCAGGCGGACCTGGCCTTTTTGGCGCCTGACGTGAAGGTTCTGGACTTTCCCGTCGTCGATAAGGCTGTCTTTACGACGACGGCTAAAAGTCTCGACCGGATGGCTCGGCAGATGGAAGCCCTGGGCCGTCTGCGCCAAGGGGATCCGGTTCTTGTCTTGGCTGCGCCGGAAGAAGCGGCACAGTACGTCATGGCTCCTCAGCGCATCGACGATGCGGCCATCGACGTCGAAATCCAAGGAGAATACGACCGCGATGACTTGTTGCAGCACCTCGTAGACGCCGGTTATGAACGGGTCGACATGGTCGAACGGCGAGGCCATTTTTCCGTCCGCGGCGACATCGTCGACATCTTTGCCGTCAATGAACCGCAGCCCCTGCGCCTGGCCTTCTTTGGCGATGAACTGGAAAGCATCCGCGCCTTTGACGTCGACAGCCAAAAGTCGCTGTATGATGCCGAACGGGCGCGGATTTTGCCCGTGTCCTTGACGACGGCGGACGATGAGAAGTATACCCTCCTCGATTACGTCGAAGACGGAACCATCATCTGGGATGAACCGAATCGGGTCCGTGACGGCCTTAAAAAGATTCTCAAAGAATCGGACGATTACAAAGGCGTCCTGGCATCGTGGAAAAACATGGTCTCGCCGGAACGAAAAGTTCCTCAAATCGTCTTGTCCCTTATGGCTCAATCCGTGCCCGATATGCTCATCGACGAGTCCTTCAGCTTTGCCGCCAAGATGATGGCCAGCTTCCAAAAGCAGTTCAACCTCCTCGAAGAAGAAGTCGGCCATTGGCGAAGCTTAGGCAATACCATCGTCTTTGTCATCAACAGCAGAGAGCGCATTGCCTCCCTCAAAGCCTGGATGAAGCAGCATGACCTTTCGATTGCCGATTATGACGATGAAAAAAGCGCCGCCGGCGGCATGTATATCGTCGAAGGCGAAATCCACGACGGTTTTGAACTACCTTATGCCAAGGTCGTCGTCGTCGCCGAACGGGACGTTTTCGGTACCCAGAAACGACGCCTGCGCCACCGCGTAGCTAAGGGCCAGGAAATCAGCGTCTTTACCAGTCTGAAGGCCGGCGACTACGTCGTCCATGAAGTCCACGGCATCGGCCGCTACATGGGCATTAAGACCATTGAAATGGATGGCGTCCATAAAGATTATCTCGAAATCCACTATGCGGGAAAGGATATTCTTTACGTGCCGACGGATCAGTTATCCCTGCTCCAGCGCTACATCGGCAACGAAGGCGATACGCCGAAATTACAGAAGATGGGCGGATCGGACTGGCAGAAGATACGCTCTAAGGCTCAGAAGTCGATTACCGATTTGGCGGAAAAACTCGTCGCCCTCTACGCCAAAAGGGAGGTCGTCTCCGGCTATGCCTTCCCGCCGGATACGCCCTTTCAGAAAGAATTTGAAGAAGCCTTTCCCTATGAAGAAACGGAAGATCAGTTAAAAGCCGTCCGTGAAATCAAGGACAGCATGGAAAAACCGACGCCTATGGACCGCCTGGTCTGCGGGGATGTCGGCTTCGGCAAGACGGAAGTGGCCATGAGGGCTATTTTTAAGGCCGTCACAGCCGGTAAGCAGGTTGCCGTCTTGGTACCGACGACGGTTTTGTCTCAGCAGCACTTCCAAACCTTTATGGAACGGTTCGGTCCCTTCGGTGTCCACGTCGAAGTCCTCAACCGTTTCCGTTCCTATAAAGAAAAGAAATCGATCCTGGCTAGGACCTTGACCGGCGATATCGACATCCTCATCGGGACTCACAGCCTGCTCAACAAGAACGTTAAATTCAAGTCCCTGGGCCTTCTCGTCGTCGACGAAGAACAGCGTTTCGGCGTCGCCCAAAAGGAAAAATGGAAGGCCTGGGCCGCCCATATCGACGTCTTGTCCCTCAGTGCTACGCCGATTCCGCGGACTCTCCACATGTCTTTGGTCAACCTGCGGGAAATGTCGGTCATCGAATCGCCGCCGACGGACCGCTTCCCGGTCCAGACTTACGTCGCTGAATACGACGCCCGCATCGTCAGTGACGCCATCATGCGCGAAAAGCGGCGGGGCGGCCAGGTCTTTTTCGTCTATAACCGTGTCGCTTCCATCGAACGCATGAAGGACGAACTGCAGGCCCTCCTGCCGGACATCACCATCGGTATTGCCCACGGTCAGATGGCCGGCAGCATGCTCGAGTCGATGATGTTCGATTTCTATGAAGGAAAGTACGACGTCCTCCTCTGCTCGAGCCTCGTCGAAAACGGCCTTGACGTAGCCAATGCCAATACGATCATCATTTACGACGCCGACCACTTCGGCCTGTCCCAGCTCTATCAGATGCGGGGCCGCGTCGGCCGGAGCCACCGCATGGCCTATGCATACTTCTTGTACCGCAGGGACAAGGTTTTGTCCGAAGTCGCTGAAAAACGGCTCCAAGCCATCAAAGAATTTACCGAACTCGGTTCCGGTTTTAAAATCGCCATGCGCGACCTTGAAATCCGCGGCGCCGGCAACCTCCTCGGTCGGGAACAGCACGGCAACATCGCCAGCGTCGGCTTTGCCATGTACTGCCATATGCTGGAAGAAGCCATTGCCAAGGCCCAGACCGGGAAAGAAGTGGAACCGCCGCCGCCGGAAACGGTCATGGAAATCCACGTCGACGCCTTTATCGACAACGAATATATTCAAAACGGCGGTCAGAAAATCGACATGTACCAGCGCTTGGCCGTCGTCTCGTCGAAAGAAGAACTGGACGAACTGCGCCGCGAACTGGAAGACCGCTACGGCCGACCCAGTTCGTACGTCGAAAAGCTCCTGCAGGTGACAGAAACCCGCCTCGAAGCCAAGGCTCAGGGGATGGTCCTCATCGCCCAGAAGAAGGACGTCCTCGAAATCAAGTGGCGCCGCGTCTCGGACATGCCCGATTTGACGAAACTCGAAAAGCCCCTGCGCAGCCGCTTCCGCCTCGTTCCCAGCATACCGGTCATGGTCCGCGTGTCCCTTTCCGGTATCGCCGATATCCTCGACTTTATCCAGACCTTGCTGACGGCCTTTTCTGCCCTCCGAAAGGAGGATTCCCGTGACTAA
PROTEIN sequence
Length: 1095
MKQFFQWMNQDENIRSAGEAFLKPGCHSIYGLSGSVKSALVAKVLHEGPRQVVLVVPSREQAAAWQADLAFLAPDVKVLDFPVVDKAVFTTTAKSLDRMARQMEALGRLRQGDPVLVLAAPEEAAQYVMAPQRIDDAAIDVEIQGEYDRDDLLQHLVDAGYERVDMVERRGHFSVRGDIVDIFAVNEPQPLRLAFFGDELESIRAFDVDSQKSLYDAERARILPVSLTTADDEKYTLLDYVEDGTIIWDEPNRVRDGLKKILKESDDYKGVLASWKNMVSPERKVPQIVLSLMAQSVPDMLIDESFSFAAKMMASFQKQFNLLEEEVGHWRSLGNTIVFVINSRERIASLKAWMKQHDLSIADYDDEKSAAGGMYIVEGEIHDGFELPYAKVVVVAERDVFGTQKRRLRHRVAKGQEISVFTSLKAGDYVVHEVHGIGRYMGIKTIEMDGVHKDYLEIHYAGKDILYVPTDQLSLLQRYIGNEGDTPKLQKMGGSDWQKIRSKAQKSITDLAEKLVALYAKREVVSGYAFPPDTPFQKEFEEAFPYEETEDQLKAVREIKDSMEKPTPMDRLVCGDVGFGKTEVAMRAIFKAVTAGKQVAVLVPTTVLSQQHFQTFMERFGPFGVHVEVLNRFRSYKEKKSILARTLTGDIDILIGTHSLLNKNVKFKSLGLLVVDEEQRFGVAQKEKWKAWAAHIDVLSLSATPIPRTLHMSLVNLREMSVIESPPTDRFPVQTYVAEYDARIVSDAIMREKRRGGQVFFVYNRVASIERMKDELQALLPDITIGIAHGQMAGSMLESMMFDFYEGKYDVLLCSSLVENGLDVANANTIIIYDADHFGLSQLYQMRGRVGRSHRMAYAYFLYRRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLEIRGAGNLLGREQHGNIASVGFAMYCHMLEEAIAKAQTGKEVEPPPPETVMEIHVDAFIDNEYIQNGGQKIDMYQRLAVVSSKEELDELRRELEDRYGRPSSYVEKLLQVTETRLEAKAQGMVLIAQKKDVLEIKWRRVSDMPDLTKLEKPLRSRFRLVPSIPVMVRVSLSGIADILDFIQTLLTAFSALRKEDSRD*