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L1_007_000M1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_406_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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143..901
DNA (759bp) protein (253aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EEG31414.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEG31414.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAU6_9CLOT
Fe-dependent oxidoreductase, alcohol dehydrogenase
L1_007_000M1_scaffold_406_2
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

920..1840
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=G4Q3G6_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22962.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L1_007_000M1_scaffold_406_3
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1909..2907
DNA (999bp) protein (333aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGK1_9FIRM
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Aldehyde oxidase {ECO:0000313|EMBL:KHM52648.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
L1_007_000M1_scaffold_406_4
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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3043..3684
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J1Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25122.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
NADPH-dependent FMN reductase
L1_007_000M1_scaffold_406_5
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3698..4771
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KP86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEX68041.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
hypothetical protein
L1_007_000M1_scaffold_406_6
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4800..5396
DNA (597bp) protein (199aa)
Flavodoxin n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2VWQ5_9FIRM
Flavodoxin {ECO:0000313|EMBL:ERL19672.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
hypothetical protein
L1_007_000M1_scaffold_406_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5676..6719
DNA (1044bp) protein (348aa)
Protein CbiG n=2 Tax=Megasphaera RepID=S7HNP8_9FIRM
Protein CbiG {ECO:0000313|EMBL:EPP18807.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
protein CbiG
L1_007_000M1_scaffold_406_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6734..7465
DNA (732bp) protein (244aa)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQT8_MEGEL
precorrin-3B C17-methyltransferase
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:CCC73788.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_406_9
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7462..8163
DNA (702bp) protein (234aa)
Precorrin-6A reductase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQT9_MEGEL
precorrin-6A reductase
Precorrin-6A reductase {ECO:0000313|EMBL:CCC73789.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_406_10
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8197..9414
DNA (1218bp) protein (406aa)
Precorrin-6Y C5 n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQU0_MEGEL
precorrin-6Y C5
Precorrin-6Y C5 {ECO:0000313|EMBL:CCC73790.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_406_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9437..10849
DNA (1413bp) protein (471aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Cobyrinic Acid a n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQU1_MEGEL
cobyrinic Acid a
L1_007_000M1_scaffold_406_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10846..11472
DNA (627bp) protein (209aa)
Precorrin-8X methylmutase n=2 Tax=Megasphaera RepID=S7HNQ3_9FIRM
Precorrin-8X methylmutase {ECO:0000313|EMBL:EPP18802.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
precorrin-8X methylmutase
L1_007_000M1_scaffold_406_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11562..12467
DNA (906bp) protein (302aa)
PHP domain protein n=1 Tax=Megasphaera sp. NM10 RepID=S7IXP1_9FIRM
PHP domain protein {ECO:0000313|EMBL:EPP14725.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
PHP domain protein
L1_007_000M1_scaffold_406_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12471..13442
DNA (972bp) protein (324aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Megasphaera RepID=S7HGR8_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EPP14724.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
N-acetylmuramoyl-L-alanine amidase
L1_007_000M1_scaffold_406_15
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13555..16839
DNA (3285bp) protein (1095aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Transcription-repair-coupling factor n=2 Tax=Megasphaera RepID=S7HGD4_9FIRM
transcription-repair coupling factor
L1_007_000M1_scaffold_406_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16856..18409
DNA (1554bp) protein (518aa)
Stage V sporulation protein B n=2 Tax=Megasphaera RepID=S7HG86_9FIRM
Stage V sporulation protein B {ECO:0000313|EMBL:EPP14722.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
stage V sporulation protein B
L1_007_000M1_scaffold_406_17
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18531..18992
DNA (462bp) protein (154aa)
Transcriptional regulator n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MV91_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDF04246.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
transcriptional regulator
L1_007_000M1_scaffold_406_18
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18989..20080
DNA (1092bp) protein (364aa)
Efflux transporter n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRZ6_MEGEL
efflux transporter
Efflux transporter {ECO:0000313|EMBL:CCC74036.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_406_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20077..23118
DNA (3042bp) protein (1014aa)
RND transporter n=1 Tax=Megasphaera sp. BL7 RepID=S7HIJ0_9FIRM
RND transporter {ECO:0000313|EMBL:CDF04248.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
RND transporter
L1_007_000M1_scaffold_406_20
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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23249..24001
DNA (753bp) protein (251aa)
Flavodoxins n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRZ4_MEGEL
flavodoxins
Flavodoxins {ECO:0000313|EMBL:CCC74034.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000M1_scaffold_406_21
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(24074..24679)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQE9_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL82986.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L1_007_000M1_scaffold_406_22
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(24707..25153)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7ITC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14721.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_000M1_scaffold_406_23
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25378..26268
DNA (891bp) protein (297aa)
33 kDa chaperonin n=2 Tax=Megasphaera RepID=S7HLR0_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
heat shock protein 33
L1_007_000M1_scaffold_406_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26297..27094
DNA (798bp) protein (266aa)
Probable 6-oxopurine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Probable 6-oxopurine nucleoside phosphorylase n=2 Tax=Megasphaera RepID=S7HM10_9FIRM
methylthioadenosine phosphorylase
L1_007_000M1_scaffold_406_25
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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27094..28149
DNA (1056bp) protein (352aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRR6_MEGEL
S-methyl-5-thioribose-1-phosphate isomerase
L1_007_000M1_scaffold_406_26
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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28167..29408
DNA (1242bp) protein (414aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Adenosylhomocysteinase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRR5_MEGEL
adenosylhomocysteinase
L1_007_000M1_scaffold_406_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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29425..30705
DNA (1281bp) protein (427aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281, ECO:0000313|EMBL:CCC73954.1}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VRR4_MEGEL
5-methylthioadenosine/S-adenosylhomocysteine deaminase
L1_007_000M1_scaffold_406_28
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30793..31068
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HMX0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPP16640.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_000M1_scaffold_406_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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31442..31927
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B117_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46677.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Predicted acetyltransferase
L1_007_000M1_scaffold_406_30
unknown

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31937..32155
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 52 in total

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