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L1_007_000M1_scaffold_1125

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1125_1
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(181..1581)
DNA (1401bp) protein (467aa)
Transposase IS116/IS110/IS902 family n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GMR9_9FIRM
Transposase IS116/IS110/IS902 family {ECO:0000313|EMBL:CDE28316.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
insertion element IS116
L1_007_000M1_scaffold_1125_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1899..3131
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24213.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein DUF4038
L1_007_000M1_scaffold_1125_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3124..3429
DNA (306bp) protein (102aa)
PTS system, beta-glucoside-specific, IIB component (EC:2.7.1.69)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QD04_9FIRM
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:CCZ24214.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1125_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3447..4304)
DNA (858bp) protein (286aa)
Transcriptional regulator LysR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q627_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCZ24215.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
LysR family transcriptional regulator
L1_007_000M1_scaffold_1125_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4413..5252
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24216.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
short-chain dehydrogenase/reductase
L1_007_000M1_scaffold_1125_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5257..6237
DNA (981bp) protein (327aa)
Aldo/keto reductase family Oxidoreductase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G920_9FIRM
Aldo/keto reductase family Oxidoreductase {ECO:0000313|EMBL:EFW05461.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
oxidoreductase, aryl-alcohol dehydrogenase like protein
L1_007_000M1_scaffold_1125_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6237..6593
DNA (357bp) protein (119aa)
Alpha/beta hydrolase fold protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT94_9FIRM
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCZ24222.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
alpha/beta hydrolase
L1_007_000M1_scaffold_1125_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6608..7240
DNA (633bp) protein (211aa)
Peptidase S15 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6P8_9FIRM
Peptidase S15 {ECO:0000313|EMBL:CCZ24223.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
peptidase S15
L1_007_000M1_scaffold_1125_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7254..7475
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QD11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24224.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1125_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7478..7894
DNA (417bp) protein (139aa)
Flavodoxin protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q638_9FIRM
Flavodoxin protein {ECO:0000313|EMBL:CCZ24225.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1125_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7942..8643)
DNA (702bp) protein (234aa)
Putative membrane protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPU3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ24226.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1125_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8780..9517
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23752.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L1_007_000M1_scaffold_1125_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9606..10058
DNA (453bp) protein (151aa)
RNA polymerase ECF subfamily sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5D7_9FIRM
RNA polymerase ECF subfamily sigma factor {ECO:0000313|EMBL:CCZ23753.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1125_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10048..11580
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23754.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1125_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11897..12148
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23755.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1125_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12297..12830
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79838.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1125_17
unknown

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12975..13073
DNA (99bp) protein (33aa)

This feature has no annotations

L1_007_000M1_scaffold_1125_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13045..13179
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24080.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1125_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13269..13832
DNA (564bp) protein (188aa)
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCP7_9FIRM
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein {ECO:0000313|EMBL:CCZ24079.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative intracellular protease/amidase
L1_007_000M1_scaffold_1125_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13834..14385
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7G8T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05523.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DJ-1 family protein
L1_007_000M1_scaffold_1125_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14394..15158
DNA (765bp) protein (255aa)
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N2E3_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS19903.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator, RpiR family
L1_007_000M1_scaffold_1125_22
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15278..16459
DNA (1182bp) protein (394aa)
Major facilitator superfamily transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G909_9FIRM
Major facilitator superfamily transporter {ECO:0000313|EMBL:EFW05450.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
major facilitator superfamily protein
L1_007_000M1_scaffold_1125_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16459..16944
DNA (486bp) protein (162aa)
Hydrolase NUDIX family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q713_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ24363.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NUDIX family hydrolase
L1_007_000M1_scaffold_1125_24
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16953..18380)
DNA (1428bp) protein (476aa)
6-phospho-beta-glucosidase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G6E9_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CDB17079.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
6-phospho-beta-glucosidase
L1_007_000M1_scaffold_1125_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18465..19199)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24364.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, RpiR family
L1_007_000M1_scaffold_1125_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(19240..19848)
DNA (609bp) protein (203aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6J0_9FIRM
Peroxiredoxin {ECO:0000313|EMBL:CCZ24365.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1125_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20059..20883
DNA (825bp) protein (275aa)
hisK1; histidinol-phosphatase HisK (EC:3.1.3.15)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24366.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1125_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20988..22406
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24367.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
FAD dependent oxidoreductase family protein
L1_007_000M1_scaffold_1125_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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22577..23839
DNA (1263bp) protein (421aa)
UPI00031AC668 related cluster n=1 Tax=unknown RepID=UPI00031AC668
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
PTS system, IIc component
L1_007_000M1_scaffold_1125_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23852..25771
DNA (1920bp) protein (640aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
UPI000302ED4B related cluster n=1 Tax=unknown RepID=UPI000302ED4B
PRD/PTS system IIA 2 domain protein {ECO:0000313|EMBL:CCZ63179.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Displaying items 1-30 of 32 in total

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