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L1_007_000M1_scaffold_1373

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1373_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..1186
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RRD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35412.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_000M1_scaffold_1373_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1200..2783
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24855.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
pilB; type IV pilus assembly protein PilB
L1_007_000M1_scaffold_1373_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2795..3844
DNA (1050bp) protein (350aa)
Twitching motility protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QET7_9FIRM
Twitching motility protein {ECO:0000313|EMBL:CCZ24854.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
type IV pilus retraction protein PilT
L1_007_000M1_scaffold_1373_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4049..5053)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24853.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5110..5406)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QV00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24852.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5557..5970
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24851.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1373_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5967..7094
DNA (1128bp) protein (376aa)
Exonuclease SbcCD D subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Z0_9FIRM
Exonuclease SbcCD D subunit {ECO:0000313|EMBL:CCZ24850.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
exonuclease SbcD
L1_007_000M1_scaffold_1373_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7081..10092
DNA (3012bp) protein (1004aa)
sbcC; exonuclease SbcC (EC:3.1.11.-)
Exonuclease SbcC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QET1_9FIRM
Exonuclease SbcC {ECO:0000313|EMBL:CCZ24849.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10152..11591
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8E5_9FIRM
L1_007_000M1_scaffold_1373_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11707..11811
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24847.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12019..12360
DNA (342bp) protein (114aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24846.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12406..12882
DNA (477bp) protein (159aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Y4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ24845.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator
L1_007_000M1_scaffold_1373_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12872..14209
DNA (1338bp) protein (446aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QES5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ24844.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
multidrug transporter MatE
L1_007_000M1_scaffold_1373_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14222..14830)
DNA (609bp) protein (203aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8E1_9FIRM
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
L1_007_000M1_scaffold_1373_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14930..15748
DNA (819bp) protein (273aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Phosphomethylpyrimidine kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUZ1_9FIRM
L1_007_000M1_scaffold_1373_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15750..16394
DNA (645bp) protein (215aa)
Radical SAM protein TatD family-associated n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRI8_9FIRM
Radical SAM protein TatD family-associated {ECO:0000313|EMBL:CCZ24841.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
radical SAM-superfamily protein
L1_007_000M1_scaffold_1373_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16409..17143
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24840.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1373_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17192..17584
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QES0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24839.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17571..18029)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24838.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
TspO and MBR-like protein
L1_007_000M1_scaffold_1373_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18131..18880
DNA (750bp) protein (250aa)
Exodeoxyribonuclease III n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUY6_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:CCZ24837.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1373_21
unknown

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18893..19003
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_000M1_scaffold_1373_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19036..20271)
DNA (1236bp) protein (412aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRI3_9FIRM
L1_007_000M1_scaffold_1373_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20336..20974)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24835.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21073..21495
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QER3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24834.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1373_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21610..21978
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24833.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
nitrogen regulatory protein P-II
L1_007_000M1_scaffold_1373_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21998..23230
DNA (1233bp) protein (411aa)
Adenylate/guanylate cyclase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUY0_9FIRM
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
adenylate/guanylate cyclase
L1_007_000M1_scaffold_1373_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23314..24171
DNA (858bp) protein (286aa)
Uncharacterized conserved protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRH7_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ24831.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1373_28
unknown

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comp(24181..24315)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 28 items

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