ggKbase home page

L1_007_000M1_scaffold_1515

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1515_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB37_9FIRM
Cysteine synthase {ECO:0000313|EMBL:CCZ23494.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1515_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

225..1526
DNA (1302bp) protein (434aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3X0_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CCZ23495.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1515_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1551..2087)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23496.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1515_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2217..3056
DNA (840bp) protein (280aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRB3_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CCZ23497.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative ATPase of the PP-loop superfamily implicated in cell cycle control
L1_007_000M1_scaffold_1515_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3110..3541)
DNA (432bp) protein (144aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4U2_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ23498.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative transcriptional regulator
L1_007_000M1_scaffold_1515_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3631..4950)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Aspartokinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB63_9FIRM
aspartate kinase
L1_007_000M1_scaffold_1515_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5079..5729
DNA (651bp) protein (217aa)
GDSL-like protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZY0_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EDS75977.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
lipolytic protein G-D-S-L family
L1_007_000M1_scaffold_1515_8
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

6032..6622
DNA (591bp) protein (197aa)
Nitroreductase n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RRC0_FIBSS
nitroreductase family protein
Nitroreductase family protein {ECO:0000313|EMBL:ADL24598.1}; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
L1_007_000M1_scaffold_1515_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6645..7280)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23452.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1515_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7280..8305)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMN1_9FIRM
queA; tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein QueA)
L1_007_000M1_scaffold_1515_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8306..9439)
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3S3_9FIRM
queuine/archaeosine tRNA-ribosyltransferase
L1_007_000M1_scaffold_1515_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9514..10458)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QAY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23449.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
G3E family GTPase-like protein
L1_007_000M1_scaffold_1515_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10463..11569)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23448.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Putative GTPases (G3E family)
L1_007_000M1_scaffold_1515_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11665..12798
DNA (1134bp) protein (378aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR31_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ23447.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA methyltransferase
L1_007_000M1_scaffold_1515_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12871..13413
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23446.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1515_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13644..15578
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23445.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1515_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15734..16459
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QAX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23444.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Capsular polysaccharide biosynthesis protein
L1_007_000M1_scaffold_1515_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16446..17105
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23443.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
polysaccharide biosynthesis protein
L1_007_000M1_scaffold_1515_19
unknown

Not on your lists

17124..17240
DNA (117bp) protein (39aa)

This feature has no annotations

L1_007_000M1_scaffold_1515_20
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

Not on your lists

17396..17803
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R6ZZC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD51420.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
L1_007_000M1_scaffold_1515_21
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17881..18846
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PTW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47219.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
cell envelope-related transcriptional attenuator
L1_007_000M1_scaffold_1515_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18860..19522
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24873.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1515_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19719..20618
DNA (900bp) protein (300aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BYM4_9FIRM
galF; UTP-glucose-1-phosphate uridylyltransferase
Displaying 23 items

View Taxonomy