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L1_007_000M1_scaffold_1704

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1704_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(152..619)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24800.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(667..1812)
DNA (1146bp) protein (382aa)
UPF0348 protein HMPREF0978_03046 n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AQ48_9FIRM
UPF0348 protein HMPREF0978_03046 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_1704_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1809..2258)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25197.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1704_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2258..3013)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25196.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1704_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3164..3883
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ribosomal large subunit pseudouridine synthase B (EC:6.1.1.1)
Pseudouridine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8Y6_9FIRM
L1_007_000M1_scaffold_1704_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3931..4167
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25194.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4418..6166
DNA (1749bp) protein (583aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Threonine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9F7_9FIRM
threonyl-tRNA synthetase
L1_007_000M1_scaffold_1704_8
unknown

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6183..6308
DNA (126bp) protein (42aa)

This feature has no annotations

L1_007_000M1_scaffold_1704_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6305..6940
DNA (636bp) protein (212aa)
Transcriptional regulator TetR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW34_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ25192.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
TetR family transcriptional regulator
L1_007_000M1_scaffold_1704_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7136..7243
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25191.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7511..7846
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25190.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
AbiQ-like protein
L1_007_000M1_scaffold_1704_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8119..9003
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25189.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ROK family protein
L1_007_000M1_scaffold_1704_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9014..9598
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25188.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1704_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9674..10561
DNA (888bp) protein (296aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Thymidylate synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW17_9FIRM
thyA; thymidylate synthase
L1_007_000M1_scaffold_1704_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10561..11031
DNA (471bp) protein (157aa)
Dihydrofolate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSJ2_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:CCZ25186.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1704_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11036..11749
DNA (714bp) protein (238aa)
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8X7_9FIRM
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:CCZ25185.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phospholipid/glycerol acyltransferase
L1_007_000M1_scaffold_1704_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11749..12405
DNA (657bp) protein (219aa)
Alpha/beta hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFS7_9FIRM
Alpha/beta hydrolase {ECO:0000313|EMBL:CCZ25184.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1704_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12697..13158)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25183.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative HD superfamily hydrolase
L1_007_000M1_scaffold_1704_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13155..14465)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25182.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA methylase
L1_007_000M1_scaffold_1704_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14465..15046)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25181.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative HD superfamily hydrolase
L1_007_000M1_scaffold_1704_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15150..15653
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25180.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16307..16549)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23259.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_1704_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16762..17148)
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RPZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45079.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_000M1_scaffold_1704_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17188..17415)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q855_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24910.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17564..17932
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24911.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_26
unknown

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17939..18271
DNA (333bp) protein (111aa)

This feature has no annotations

L1_007_000M1_scaffold_1704_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18294..19913
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25326.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_1704_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19915..20571
DNA (657bp) protein (219aa)
ABC transporter n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9E0_9FIRM
ABC transporter {ECO:0000313|EMBL:CCZ25325.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transporter
L1_007_000M1_scaffold_1704_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20689..21297)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QZ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92823.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_000M1_scaffold_1704_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21682..22461
DNA (780bp) protein (260aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS17411.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS17411.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N6H3_9FIRM
Displaying items 1-30 of 45 in total

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