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L1_007_000M1_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_388_1
unknown

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2..193
DNA (192bp) protein (64aa)

This feature has no annotations

L1_007_000M1_scaffold_388_2
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

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436..927
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R7A509_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD50539.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
L1_007_000M1_scaffold_388_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1013..1291
DNA (279bp) protein (93aa)
Phosphotransferase system n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q443_9FIRM
Phosphotransferase system {ECO:0000313|EMBL:CCZ23283.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_388_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1379..2332
DNA (954bp) protein (318aa)
Ribose ABC superfamily ATP binding cassette transporter binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA98_9FIRM
Ribose ABC superfamily ATP binding cassette transporter binding protein {ECO:0000313|EMBL:CCZ23284.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
rbsB; ribose transport system substrate-binding protein
L1_007_000M1_scaffold_388_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2332..3633
DNA (1302bp) protein (434aa)
Sensory transduction histidine kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q397_9FIRM
Sensory transduction histidine kinase {ECO:0000313|EMBL:CCZ23285.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
sensory transduction histidine kinase
L1_007_000M1_scaffold_388_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3626..4306
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QM70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23286.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
response regulator
L1_007_000M1_scaffold_388_7
Streptococcus pasteurianus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4299..5585
DNA (1287bp) protein (429aa)
Sugar transport system substrate-binding protein n=2 Tax=Streptococcus RepID=F5X4A7_STRPX
sugar transport system substrate-binding protein
Sugar transport system substrate-binding protein {ECO:0000313|EMBL:BAK29247.1}; TaxID=981540 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC; 1723-81).;"
L1_007_000M1_scaffold_388_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5742..6164
DNA (423bp) protein (141aa)
levA; PTS system sugar-specific transporter subunit IIA (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQJ2_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:CCZ23287.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_388_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6177..6668
DNA (492bp) protein (164aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q447_9FIRM
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:CCZ23288.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_388_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6696..7541
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QAA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23289.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L1_007_000M1_scaffold_388_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7543..8379
DNA (837bp) protein (279aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3A2_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CCZ23290.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
levD; PTS system mannose-specific transporter subunit IID
L1_007_000M1_scaffold_388_12
Streptococcus ratti, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8393..8677
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Streptococcus ovis RepID=UPI000382200D
Uncharacterized protein {ECO:0000313|EMBL:EMP69605.1}; TaxID=699248 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus ratti FA-1 = DSM 20564.;"
PTS system fructose-and mannose-inducible transporter subunit II
L1_007_000M1_scaffold_388_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8733..9479
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QM76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23291.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, RpiR family
L1_007_000M1_scaffold_388_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9574..10542
DNA (969bp) protein (323aa)
Drug resistance transport protein major facilitator subfamily (MFS) EmrB/QacA subfamily n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5Z5_9FIRM
Drug resistance transport protein major facilitator subfamily (MFS) EmrB/QacA subfamily {ECO:0000313|EMBL:CCZ24180.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_388_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10517..10945
DNA (429bp) protein (143aa)
Drug resistance transport protein major facilitator subfamily (MFS) EmrB/QacA subfamily n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5Z5_9FIRM
Drug resistance transport protein major facilitator subfamily (MFS) EmrB/QacA subfamily {ECO:0000313|EMBL:CCZ24180.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
major facilitator superfamily permease
L1_007_000M1_scaffold_388_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10935..11705
DNA (771bp) protein (257aa)
fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase FabG1 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCX2_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase FabG1 {ECO:0000313|EMBL:CCZ24179.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_388_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11717..12007
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24178.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_388_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12017..12439)
DNA (423bp) protein (141aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2W0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB91392.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
archaeal flagellin N-terminal-like domain
L1_007_000M1_scaffold_388_19
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12436..13044)
DNA (609bp) protein (203aa)
Putative multitransmembrane protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K486_CLOPA
putative multitransmembrane protein
Putative multitransmembrane protein {ECO:0000313|EMBL:AGK95354.1}; Flags: Precursor;; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L1_007_000M1_scaffold_388_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13114..15474)
DNA (2361bp) protein (787aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV7_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDS75954.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Icc family phosphohydrolase
L1_007_000M1_scaffold_388_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15664..16407
DNA (744bp) protein (248aa)
DeoR family Bacterial regulatory protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT56_9FIRM
DeoR family Bacterial regulatory protein {ECO:0000313|EMBL:CCZ24177.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_388_22
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16407..16586
DNA (180bp) protein (60aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Tagatose-6-phosphate kinase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGZ9_ACEWD
L1_007_000M1_scaffold_388_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16688..17161
DNA (474bp) protein (158aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Tagatose-6-phosphate kinase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ADB8_9FIRM
fruK; 1-phosphofructokinase
L1_007_000M1_scaffold_388_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17255..19027
DNA (1773bp) protein (591aa)
PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component {ECO:0000313|EMBL:CDH91201.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDH91201.1};; PTS system, fructose-specific component family {ECO:0000313|EMBL:ACD21777.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
PTS system, fructose-specific component family n=2 Tax=Clostridium botulinum B RepID=B2TS04_CLOBB
PTS system, fructose-specific component family
L1_007_000M1_scaffold_388_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19102..19533
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24175.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_388_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19856..21523
DNA (1668bp) protein (556aa)
Two-component system PleD related family response regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCW7_9FIRM
Two-component system PleD related family response regulator {ECO:0000313|EMBL:CCZ24174.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
two-component system, PleD related family, response regulator
L1_007_000M1_scaffold_388_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21578..22339
DNA (762bp) protein (254aa)
Copper homeostasis protein cutC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6K8_9FIRM
Copper homeostasis protein cutC {ECO:0000313|EMBL:CCZ24173.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Uncharacterized protein involved in copper resistance
L1_007_000M1_scaffold_388_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22329..23171
DNA (843bp) protein (281aa)
Hydrolase alpha/beta domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT52_9FIRM
Hydrolase alpha/beta domain protein {ECO:0000313|EMBL:CCZ24172.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
esterase
L1_007_000M1_scaffold_388_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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23168..24790
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24171.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_388_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24904..25326
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24170.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying items 1-30 of 76 in total

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