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L1_007_000M1_scaffold_410

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_410_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..544
DNA (543bp) protein (181aa)
PTS system lichenan-specific enzyme IIC component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6E4_9FIRM
PTS system lichenan-specific enzyme IIC component {ECO:0000313|EMBL:CCZ24325.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_410_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

693..1229
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24324.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_410_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1339..3453
DNA (2115bp) protein (705aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDS18218.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDS18218.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glnA3; Type-3 glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N609_9FIRM
L1_007_000M1_scaffold_410_4
Lactobacillus curieae, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3489..4199)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Lactobacillus buchneri (strain NRRL B-30929) RepID=F4FTM3_LACBN
Permease {ECO:0000313|EMBL:KHD02686.1}; TaxID=1138822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus curieae.;"
hypothetical protein
L1_007_000M1_scaffold_410_5
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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4298..5149
DNA (852bp) protein (284aa)
Transcriptional regulator, LysR family n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAH2_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS72445.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
LysR family transcriptional regulator
L1_007_000M1_scaffold_410_6
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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5210..6166
DNA (957bp) protein (319aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JDM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY47071.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L1_007_000M1_scaffold_410_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6177..6596)
DNA (420bp) protein (140aa)
VanZ-like protein n=5 Tax=Erysipelotrichaceae RepID=B0N5Z5_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EDS18204.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
phosphotransbutyrylase
L1_007_000M1_scaffold_410_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6888..8255
DNA (1368bp) protein (456aa)
Amino acid carrier protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C519_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EDS73763.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
sodium/alanine symporter family protein
L1_007_000M1_scaffold_410_9
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

comp(8261..9034)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LM47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59819.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
LysR family transcriptional regulator
L1_007_000M1_scaffold_410_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9132..9749
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q685_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24013.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_410_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9792..10628
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24014.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_410_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10683..12116
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24015.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phospholipase/carboxylesterase
L1_007_000M1_scaffold_410_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12225..13643)
DNA (1419bp) protein (473aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24016.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_410_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13730..15580)
DNA (1851bp) protein (617aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C516_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS73760.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC transporter
L1_007_000M1_scaffold_410_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15616..16653)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RI89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46539.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_000M1_scaffold_410_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16743..17996
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R3_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
celB3; cellobiose permease IIC component CelB
L1_007_000M1_scaffold_410_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18015..20540
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05835.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glycoside hydrolase
L1_007_000M1_scaffold_410_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(20566..21549)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05972.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_000M1_scaffold_410_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21749..23041
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7Q3_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
celB6; PTS system lactose/cellobiose-specific iic component
L1_007_000M1_scaffold_410_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23067..25316
DNA (2250bp) protein (750aa)
Alpha-L-rhamnosidase n=2 Tax=Coprobacillus RepID=E7G7Q4_9FIRM
Alpha-L-rhamnosidase {ECO:0000313|EMBL:EFW05974.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000M1_scaffold_410_21
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25309..26121
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW02983.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_410_22
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26153..27124
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05833.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transcriptional regulator with cupin sensor, AraC family
L1_007_000M1_scaffold_410_23
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27261..28637
DNA (1377bp) protein (459aa)
rhaB; rhamnulokinase RhaB (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7S1_9FIRM
Rhamnulokinase {ECO:0000313|EMBL:EFW05842.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L1_007_000M1_scaffold_410_24
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28637..29461
DNA (825bp) protein (275aa)
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
Rhamnulose-1-phosphate aldolase n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J1I1_BUTFI
L1_007_000M1_scaffold_410_25
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29471..30889
DNA (1419bp) protein (473aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L-arabinose isomerase (EC:5.3.1.4)
Putative L-arabinose isomerase n=1 Tax=Clostridium sp. CAG:448 RepID=R6SRW2_9CLOT
L1_007_000M1_scaffold_410_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30912..31331
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06544.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L1_007_000M1_scaffold_410_27
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31343..31930)
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NPB6_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEF94997.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Transcriptional regulator, TetR family
L1_007_000M1_scaffold_410_28
Eggerthia catenaformis, Eggerthia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32087..34003
DNA (1917bp) protein (639aa)
2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34)
Uncharacterized protein n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2PAL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMD17402.1}; TaxID=999415 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Eggerthia.;" source="Eggerthia catenaformis OT 569 = DSM 20559.;"
L1_007_000M1_scaffold_410_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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34016..34777
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3L4_9FIRM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCZ23400.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
short-chain dehydrogenase/reductase SDR
L1_007_000M1_scaffold_410_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

35009..36604
DNA (1596bp) protein (532aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QAN6_9FIRM
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CCZ23399.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
family 5 extracellular solute-binding protein
Displaying items 1-30 of 47 in total

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