ggKbase home page

L1_007_000M1_scaffold_604

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_604_1
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(43..1179)
DNA (1137bp) protein (379aa)
Uncharacterized protein (Fragment) n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NWI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF92422.1}; Flags: Fragment;; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
integrase catalytic subunit
L1_007_000M1_scaffold_604_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


1456..1878
DNA (423bp) protein (141aa)
50S ribosomal protein L13 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTU9_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
LSU ribosomal protein L13P
L1_007_000M1_scaffold_604_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


1890..2282
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQG6_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SSU ribosomal protein S9P
L1_007_000M1_scaffold_604_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2429..3016)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24435.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_604_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3150..3272)
DNA (123bp) protein (41aa)
Site-specific recombinase, phage integrase family n=2 Tax=Erysipelotrichaceae RepID=B0N4U0_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS18692.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Phage integrase family.
L1_007_000M1_scaffold_604_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4359..5633
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24434.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000M1_scaffold_604_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5920..6672)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24433.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_604_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6866..7687
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24432.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_604_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7767..10367
DNA (2601bp) protein (867aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24431.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
PTS system transcriptional activator
L1_007_000M1_scaffold_604_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10692..10997
DNA (306bp) protein (102aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24430.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10998..12332
DNA (1335bp) protein (445aa)
PTS system lactose/cellobiose family IIC component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDN0_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
PTS lactose/cellobiose IIC component
L1_007_000M1_scaffold_604_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12334..13764
DNA (1431bp) protein (477aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q798_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24428.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14211..14489
DNA (279bp) protein (93aa)
SMI1 / KNR4 family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTT8_9FIRM
SMI1 / KNR4 family protein {ECO:0000313|EMBL:CCZ24427.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14688..15431
DNA (744bp) protein (248aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24426.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15644..15907
DNA (264bp) protein (88aa)
Transcriptional regulator ArsR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6Q4_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CCZ24425.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator (ArsR family)
L1_007_000M1_scaffold_604_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15910..16545
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24424.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_604_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16654..17220
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q792_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24423.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
TetR family transcriptional regulator
L1_007_000M1_scaffold_604_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17222..17980
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24422.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
acetyltransferase
L1_007_000M1_scaffold_604_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17985..19301
DNA (1317bp) protein (439aa)
Replication-associated recombination protein A n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQE9_9FIRM
Replication-associated recombination protein A {ECO:0000313|EMBL:CCZ24421.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L1_007_000M1_scaffold_604_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19416..19772
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24420.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_604_21
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

19723..20574
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TPC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC75283.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L1_007_000M1_scaffold_604_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20567..21160
DNA (594bp) protein (198aa)
TetR family transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDL8_9FIRM
TetR family transcriptional regulator {ECO:0000313|EMBL:CCZ24419.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
TetR family transcriptional regulator
L1_007_000M1_scaffold_604_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21157..22191
DNA (1035bp) protein (345aa)
Putative chlorophyll synthesis pathway BchC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q786_9FIRM
Putative chlorophyll synthesis pathway BchC {ECO:0000313|EMBL:CCZ24418.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
threonine dehydrogenase or related Zn-dependent dehydrogenase
L1_007_000M1_scaffold_604_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22217..22540)
DNA (324bp) protein (108aa)
Transcriptional regulator HxlR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTS8_9FIRM
Transcriptional regulator HxlR family {ECO:0000313|EMBL:CCZ24417.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, HxlR family
L1_007_000M1_scaffold_604_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23041..23226
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24416.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23247..23867)
DNA (621bp) protein (207aa)
LytTr DNA-binding domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6P3_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CCZ24415.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
response regulator receiver protein
L1_007_000M1_scaffold_604_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23864..24445)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24414.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24582..25856
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q780_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24413.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_604_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25858..26619
DNA (762bp) protein (254aa)
ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTS3_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ24412.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC transporter family protein
L1_007_000M1_scaffold_604_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26733..27749
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24411.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Displaying items 1-30 of 77 in total

View Taxonomy