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L1_007_000M1_scaffold_933

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_933_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(86..484)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B025_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78738.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L1_007_000M1_scaffold_933_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(702..2165)
DNA (1464bp) protein (488aa)
ascB; 6-phospho-beta-glucosidase AscB (EC:3.2.1.86)
Glycosyl hydrolase family 1 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QE22_9FIRM
Glycosyl hydrolase family 1 {ECO:0000313|EMBL:CCZ24549.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_933_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2231..3166)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24548.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transporter protein
L1_007_000M1_scaffold_933_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3292..4179
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24547.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator
L1_007_000M1_scaffold_933_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4194..4856)
DNA (663bp) protein (221aa)
Hydrogenase accessory protein HypB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQT3_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:CCZ24546.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hydrogenase accessory protein HypB
L1_007_000M1_scaffold_933_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4849..5511)
DNA (663bp) protein (221aa)
Hydrogenase accessory protein HypB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q749_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:CCZ24545.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hydrogenase accessory protein HypB
L1_007_000M1_scaffold_933_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5498..5851)
DNA (354bp) protein (118aa)
Zn finger protein HypA/HybF (Possibly regulating hydrogenase expression) n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QE18_9FIRM
Zn finger protein HypA/HybF (Possibly regulating hydrogenase expression) {ECO:0000313|EMBL:CCZ24544.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L1_007_000M1_scaffold_933_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5853..8657)
DNA (2805bp) protein (935aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24543.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L1_007_000M1_scaffold_933_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8829..9425)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24542.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
L1_007_000M1_scaffold_933_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9521..9823
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24541.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_933_11
unknown

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9919..10191
DNA (273bp) protein (91aa)

This feature has no annotations

L1_007_000M1_scaffold_933_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10188..10391
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q744_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24540.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_933_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10441..11859)
DNA (1419bp) protein (473aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R2T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31719.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_000M1_scaffold_933_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11870..12802)
DNA (933bp) protein (311aa)
Mannose-6-phosphate isomerase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7E8_9FIRM
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EFW06023.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
manA; Mannose-6-phosphate isomerase, class I
L1_007_000M1_scaffold_933_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12838..13311)
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N913_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17170.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_000M1_scaffold_933_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13324..13743)
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N912_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91066.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_000M1_scaffold_933_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13825..15156)
DNA (1332bp) protein (444aa)
PTS system, lactose/cellobiose family IIC component n=4 Tax=Coprobacillus RepID=C3RJP6_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
phosphotransferase system enzyme IIC component
L1_007_000M1_scaffold_933_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15394..17295
DNA (1902bp) protein (634aa)
PRD domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N910_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31714.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
licR; transcriptional antiterminator of lichenan operon
L1_007_000M1_scaffold_933_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17336..18790)
DNA (1455bp) protein (485aa)
ascB; 6-phospho-beta-glucosidase AscB (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=3 Tax=Erysipelotrichaceae RepID=B0N920_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45554.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_000M1_scaffold_933_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18802..19428)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92167.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_000M1_scaffold_933_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19428..20894)
DNA (1467bp) protein (489aa)
Glycosyl hydrolase, family 1 n=3 Tax=Erysipelotrichaceae RepID=B0N908_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45543.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
6-phospho-beta-glucosidase
L1_007_000M1_scaffold_933_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20907..22376)
DNA (1470bp) protein (490aa)
beta-glucosidase (glycoside hydrolase, family1) (EC:3.2.1.86 3.2.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BRW3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17226.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L1_007_000M1_scaffold_933_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22540..23277)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24475.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_933_24
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23270..24265)
DNA (996bp) protein (332aa)
Oxidoreductase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7G9_9FIRM
Oxidoreductase {ECO:0000313|EMBL:EFW06044.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
oxidoreductase domain-containing protein
L1_007_000M1_scaffold_933_25
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

comp(24267..25289)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LPC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS60181.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
putative dehydrogenase
L1_007_000M1_scaffold_933_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25290..26084)
DNA (795bp) protein (265aa)
HAD-superfamily hydrolase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GG78_9FIRM
HAD-superfamily hydrolase {ECO:0000313|EMBL:EFW02982.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
HAD hydrolase
L1_007_000M1_scaffold_933_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26196..27134)
DNA (939bp) protein (313aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N919_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31723.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_000M1_scaffold_933_28
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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27302..28216
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WE68_FUSMR
Uncharacterized protein {ECO:0000313|EMBL:EEO36174.2}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
hypothetical protein
L1_007_000M1_scaffold_933_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28324..29097
DNA (774bp) protein (258aa)
Transcriptional regulator, RpiR family n=5 Tax=Erysipelotrichaceae RepID=B0N918_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31722.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative transcriptional regulator
L1_007_000M1_scaffold_933_30
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29108..29611)
DNA (504bp) protein (168aa)
Channel protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7G2_9FIRM
Channel protein {ECO:0000313|EMBL:EFW06037.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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