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L1_007_000M1_scaffold_2002

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2002_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(133..918)
DNA (786bp) protein (262aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSG3_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ25156.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_2002_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(929..2215)
DNA (1287bp) protein (429aa)
Amidohydrolase family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVZ1_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CCZ25157.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_2002_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2284..3084)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25158.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L1_007_000M1_scaffold_2002_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3178..3492)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25159.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted branched-chain amino acid permeases (azaleucine resistance)
L1_007_000M1_scaffold_2002_5
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3485..4108)
DNA (624bp) protein (208aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M1T0_9FIRM
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:CDB80137.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L1_007_000M1_scaffold_2002_6
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4148..4972)
DNA (825bp) protein (275aa)
PP-loop domain protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6CSV4_9CLOT
PP-loop domain protein {ECO:0000313|EMBL:CDA79853.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
PP-loop domain-containing protein
L1_007_000M1_scaffold_2002_7
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4959..6092)
DNA (1134bp) protein (378aa)
Aminotransferase class V n=1 Tax=Clostridium sp. CAG:710 RepID=R5TPD9_9CLOT
Aminotransferase class V {ECO:0000313|EMBL:CCZ58782.1}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:710.;"
class V aminotransferase
L1_007_000M1_scaffold_2002_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6170..7642)
DNA (1473bp) protein (491aa)
bglA.7; 6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8V6_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CCZ25165.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2002_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7785..8534
DNA (750bp) protein (250aa)
Transcriptional regulator RpiR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSH2_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ25166.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RpiR family transcriptional regulator
L1_007_000M1_scaffold_2002_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8546..9295)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25167.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
arginase
L1_007_000M1_scaffold_2002_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9345..9635)
DNA (291bp) protein (97aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9D8_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ25168.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted hydrolases of the HAD superfamily
L1_007_000M1_scaffold_2002_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9721..10509)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24804.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_2002_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10528..11415)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24805.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
permease of the drug/metabolite transporter (DMT) superfamily
L1_007_000M1_scaffold_2002_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11511..13010)
DNA (1500bp) protein (500aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRF1_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCZ24806.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_2002_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13249..14493)
DNA (1245bp) protein (415aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUV3_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ24807.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
conserved hypothetical protein
L1_007_000M1_scaffold_2002_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14618..14875)
DNA (258bp) protein (86aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E575CD
Uncharacterized protein {ECO:0000313|EMBL:CCZ24846.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2002_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15358..15597)
DNA (240bp) protein (80aa)
Transposase IS605 OrfB family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q923_9FIRM
Transposase IS605 OrfB family {ECO:0000313|EMBL:CCZ25235.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2002_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15578..16192)
DNA (615bp) protein (205aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFY7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ25234.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator
L1_007_000M1_scaffold_2002_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(16424..18820)
DNA (2397bp) protein (799aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Leucine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9I8_9FIRM
leuS; leucyl-tRNA synthetase
L1_007_000M1_scaffold_2002_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19109..20932)
DNA (1824bp) protein (608aa)
ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW67_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ25232.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ftsX-like permease family protein
L1_007_000M1_scaffold_2002_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20934..22679)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25231.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC transporter
L1_007_000M1_scaffold_2002_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22718..23656
DNA (939bp) protein (313aa)
Radical SAM protein TIGR01212 family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q917_9FIRM
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CCZ25230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
oxidoreductase Fe-S subunit
L1_007_000M1_scaffold_2002_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23790..24320)
DNA (531bp) protein (177aa)
Ribosomal subunit interface protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFY4_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCZ25229.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ribosomal subunit interface protein
L1_007_000M1_scaffold_2002_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24447..25589)
DNA (1143bp) protein (381aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9I5_9FIRM
L1_007_000M1_scaffold_2002_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25980..26219)
DNA (240bp) protein (80aa)
NifU-like protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW62_9FIRM
NifU-like protein {ECO:0000313|EMBL:CCZ25227.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
nfuA; Fe/S biogenesis protein NfuA
L1_007_000M1_scaffold_2002_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26349..26726
DNA (378bp) protein (126aa)
S1 RNA binding domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSM4_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CCZ25226.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
general stress protein 13
L1_007_000M1_scaffold_2002_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26727..28007
DNA (1281bp) protein (427aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Glucose-6-phosphate isomerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q913_9FIRM
pgi; glucose-6-phosphate isomerase
L1_007_000M1_scaffold_2002_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28067..28705
DNA (639bp) protein (213aa)
Sporulation protein YunB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFY1_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:CCZ25224.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
sporulation protein YunB
L1_007_000M1_scaffold_2002_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28690..29478
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25223.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2002_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29707..29925)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9QZY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47633.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
D,D-carboxypeptidase
Displaying items 1-30 of 34 in total

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