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L1_007_000M1_scaffold_2079

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2079_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..1119)
DNA (1119bp) protein (373aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_007_000M1_scaffold_2079_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1334..1645)
DNA (312bp) protein (104aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_007_000M1_scaffold_2079_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1648..2217)
DNA (570bp) protein (190aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_007_000M1_scaffold_2079_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2261..2923)
DNA (663bp) protein (221aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_007_000M1_scaffold_2079_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3077..3313)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24231.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ROK family protein
L1_007_000M1_scaffold_2079_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3415..3840)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24231.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
fructokinase
L1_007_000M1_scaffold_2079_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3972..4754)
DNA (783bp) protein (261aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Pyruvate formate-lyase activating enzyme n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTA3_9FIRM
pyruvate formate-lyase activating enzyme
L1_007_000M1_scaffold_2079_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4790..7054)
DNA (2265bp) protein (755aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6Q6_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:CCZ24233.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2079_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7291..7980
DNA (690bp) protein (230aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24234.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2079_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(8006..10492)
DNA (2487bp) protein (829aa)
Excinuclease ATPase subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EL21_9FIRM
Excinuclease ATPase subunit {ECO:0000313|EMBL:CDB01273.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Excinuclease ATPase subunit
L1_007_000M1_scaffold_2079_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10635..11276)
DNA (642bp) protein (214aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Deoxyribose-phosphate aldolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTA8_9FIRM
deoxyribose-phosphate aldolase
L1_007_000M1_scaffold_2079_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11254..12720)
DNA (1467bp) protein (489aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6R1_9FIRM
L1_007_000M1_scaffold_2079_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12720..14000)
DNA (1281bp) protein (427aa)
tRNA methylthiotransferase YqeV n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QD23_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:CCZ24239.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
MiaB family RNA modification protein
L1_007_000M1_scaffold_2079_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14009..14761)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q651_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24240.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2079_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14758..15498)
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPV6_9FIRM
hypothetical protein
L1_007_000M1_scaffold_2079_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15681..18248)
DNA (2568bp) protein (856aa)
Putative ATP-dependent chaperone protein ClpB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTB3_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB
L1_007_000M1_scaffold_2079_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18525..18725)
DNA (201bp) protein (67aa)
Putative hydrocarbon binding protein (Contains V4R domain) n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6R6_9FIRM
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:CCZ24243.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_2079_18
unknown

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comp(18741..18860)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 18 items

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